Pairwise Alignments

Query, 639 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 592 a.a., Bis-ABC ATPase Uup from Sphingobium sp. HT1-2

 Score =  419 bits (1076), Expect = e-121
 Identities = 246/633 (38%), Positives = 358/633 (56%), Gaps = 57/633 (9%)

Query: 3   LITIHNGLLAFGDHPLLDHADFALQENERVCLVGRNGAGKSTLMKVLAGEILLDDGKMQV 62
           +++  N  L+ G H L  H D  + + +R+ L+GRNGAGK+TL+K++ G+I  D+G   V
Sbjct: 5   ILSFENLGLSQGSHWLFRHIDIHVGQRDRLALIGRNGAGKTTLLKLIGGQIEADEGIRSV 64

Query: 63  MQDVVVSRLEQDPPRNQAGTVFDYVSGGLQGIGEQLKIYQDQLDLVATDPSESNINKLAH 122
                V  LEQDP  +   T+ D+   G                  A  P    +  +A 
Sbjct: 65  QPGARVVTLEQDPDVSAFKTLHDFALAG------------------AFAPPAHEVEAIAD 106

Query: 123 IQEQLEVSGAWRFEDRIKNVLGSLKLDGHTKLTDLSGGWQRKAALARALACDPDVLLLDE 182
                                  L +D   +    SGG +R+AA+ARALA +PD+LLLDE
Sbjct: 107 ----------------------QLGIDLSREAATASGGERRRAAIARALASEPDLLLLDE 144

Query: 183 PTNHLDVTTIEWLEGFLKDFRGSIIFISHDRAFIKSMATRIVDLDRGQLSSFP---GDYE 239
           PTNHLD+  I+WLE +L  + G+ I ISHDRAF+  +  + + LDRGQ+       G +E
Sbjct: 145 PTNHLDIAAIDWLESWLARYTGAFIVISHDRAFLTRLTRQTLWLDRGQMRRNEIGFGGFE 204

Query: 240 NYLTEKEEMLRVEELQNAE-FDKKLAQEEVWIRQGIKARRTRNEGRVRALKRLRQERSER 298
           +++    E +  EE + AE  D KL  E  W+ +G+ ARR RN+GR+  L  +R +R+  
Sbjct: 205 DWM----EAVYAEEARAAEKLDAKLKIEAHWLERGVTARRKRNQGRLAKLWEMRAQRAAM 260

Query: 299 REVQGKVNLQIDDSNRSGKIVFEAENLHYSIGGKTIVDGFSFNIMRGDRIALIGPNGCGK 358
           +  QG   + +   +   K V +AE++  + G +TI++ FS  + RGDRI ++G NG GK
Sbjct: 261 QGPQGTAKIAVASDDSKTKSVIKAEHVTKTFGDRTIINDFSLRVQRGDRIGIVGGNGAGK 320

Query: 359 STLLKILLGDLQPDSGKVHCGTKLEVAYFDQYRELLDPEKTVIDNLADGKQEVMVGGRLR 418
           STLLK+L G+L PDSG V     L++ + DQ R L+  +K+V D LA+G   + V G  +
Sbjct: 321 STLLKLLTGELAPDSGAVTLAKTLDMIFIDQQRSLMQGDKSVRDVLAEGGDWIDVRGVRK 380

Query: 419 HALSYLQDFLFSPKRARTPVKALSGGEKNRLLLARILLKANNLLVLDEPTNDLDIETLEL 478
           H   YL+DFLF P  A   V  LSGGE++RLL AR   + +NLLVLDEPTNDLD+ETL+L
Sbjct: 381 HVHGYLKDFLFDPSLAEAKVGTLSGGERSRLLFAREFARESNLLVLDEPTNDLDLETLDL 440

Query: 479 LEELLANYQGTLLLVSHDREFVDNTVTSSWIFEGDGKIEEFVGGYHDAQQQRAQVLQSRA 538
           L+E++A+Y GT+L+VSHDR+F+D TVT +   +G GK++  VGGY D   +R      R 
Sbjct: 441 LQEVIADYDGTVLIVSHDRDFLDRTVTVTLGLDGSGKVDVIVGGYADWIAKR----DPRR 496

Query: 539 AENIVKKEKVVEESPKSAPSKTKQKKLSYKLQRELEALPQRLEELEVEIAALQDIVNSPD 598
           A    KKE      PK A +     KL+YK QR+L+ LP+++EELE  IA  ++ +  P 
Sbjct: 497 APKAEKKEAAAPPPPKPAST-----KLTYKDQRDLDLLPKKIEELEAAIARDEEALADPA 551

Query: 599 FFSQPVDKTQPILDKLTATEQELEIAFERWEEL 631
            +++   K   +   +     E + A ERW EL
Sbjct: 552 LYTRDPKKFAALTAAIEKVRAEKDAAEERWLEL 584