Pairwise Alignments

Query, 639 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 561 a.a., Energy-dependent translational throttle protein EttA from Sphingobium sp. HT1-2

 Score =  340 bits (872), Expect = 1e-97
 Identities = 184/528 (34%), Positives = 303/528 (57%), Gaps = 9/528 (1%)

Query: 17  PLLDHADFALQENERVCLVGRNGAGKSTLMKVLAGEILLDDGKMQVMQDVVVSRLEQDPP 76
           P+L++ +       ++ +VG NGAGKSTL+K++AG      G+    ++V V  L Q+P 
Sbjct: 24  PVLNNINLQFYRGSKIGIVGPNGAGKSTLIKIMAGIDTDISGEAWPGENVTVGYLPQEPQ 83

Query: 77  RNQAGTVFDYVSGGLQGIGEQLKIYQDQLDLVATDPSE-----SNINKLAHIQEQLEVSG 131
            +    V + V  G + + ++L  + +++ ++  DP E     + + ++  +QEQ++ + 
Sbjct: 84  LDPTKNVLENVKDGAREMADKLDRF-NEISMIMADPPEDVDFDALMEEMGTLQEQIDAAD 142

Query: 132 AWRFEDRIKNVLGSLKLD-GHTKLTDLSGGWQRKAALARALACDPDVLLLDEPTNHLDVT 190
            W  +++++  + +L+       +  LSGG +R+ AL R L   PD+LLLDEPTNHLD  
Sbjct: 143 GWTLDNQLEIAMEALRCPPSDWSVESLSGGEKRRIALTRLLIQKPDILLLDEPTNHLDAE 202

Query: 191 TIEWLEGFLKDFRGSIIFISHDRAFIKSMATRIVDLDRGQLSSFPGDYENYLTEKEEMLR 250
           ++ WLE  LK++ GS++ I+HDR F+ ++   I++LDRG+   + G+Y  YL +K + L 
Sbjct: 203 SVTWLENHLKEYAGSVLMITHDRYFLDNVVGWILELDRGKYFPYEGNYSTYLEKKAKRLE 262

Query: 251 VEELQNAEFDKKLAQEEVWIRQGIKARRTRNEGRVRALKRLRQERSERREVQGKVNLQID 310
            E+ +     K +  E  WIRQG K R+T+++ R+   ++L    S+     GK  + I 
Sbjct: 263 QEDREATGRQKAINDELEWIRQGPKGRQTKSKARIAKFEQL--VASQENRAPGKAQIVIQ 320

Query: 311 DSNRSGKIVFEAENLHYSIGGKTIVDGFSFNIMRGDRIALIGPNGCGKSTLLKILLGDLQ 370
              R G  V EA+ +  + G K + +  SF +  G  + +IGPNG GKSTL +I+ G   
Sbjct: 321 VPERLGGKVIEAKGISKAYGDKLLFEDLSFMLPPGGIVGVIGPNGAGKSTLFRIITGKET 380

Query: 371 PDSGKVHCGTKLEVAYFDQYRELLDPEKTVIDNLADGKQEVMVGGRLRHALSYLQDFLFS 430
           PDSG++  G+ + + Y DQ R+ LDP K V + ++DG   V V G      +Y+  F F 
Sbjct: 381 PDSGEIDIGSTVRLGYVDQSRDHLDPSKNVWEEVSDGLDYVKVNGHDMSTRAYVGAFNFK 440

Query: 431 PKRARTPVKALSGGEKNRLLLARILLKANNLLVLDEPTNDLDIETLELLEELLANYQGTL 490
            +  +  V  LSGGE+NR+ +A++L +  N+L+LDEPTNDLD+ETL  LEE + N+ G  
Sbjct: 441 GQDQQKNVGKLSGGERNRVHIAKMLKRGGNVLLLDEPTNDLDVETLAALEEAIENFAGCA 500

Query: 491 LLVSHDREFVDNTVTSSWIFEGDGKIEEFVGGYHDAQQQRAQVLQSRA 538
           +++SHDR F+D   T    FEGD  +E F G +   ++ + + L   A
Sbjct: 501 VVISHDRFFLDRLATHILAFEGDSHVEWFEGNFEAYEEDKRRRLGDAA 548



 Score =  126 bits (316), Expect = 3e-33
 Identities = 89/297 (29%), Positives = 147/297 (49%), Gaps = 52/297 (17%)

Query: 315 SGKIVFEAENLHYSIGG--KTIVDGFSFNIMRGDRIALIGPNGCGKSTLLKILLGDLQPD 372
           S +  +  +N+  +  G  K +++  +    RG +I ++GPNG GKSTL+KI+ G     
Sbjct: 4   SSQYAYVMKNMTKTFPGAPKPVLNNINLQFYRGSKIGIVGPNGAGKSTLIKIMAGIDTDI 63

Query: 373 SGKVHCGTKLEVAYFDQYRELLDPEKTVIDNLADGKQEV-----------MV-------- 413
           SG+   G  + V Y  Q  + LDP K V++N+ DG +E+           M+        
Sbjct: 64  SGEAWPGENVTVGYLPQEPQ-LDPTKNVLENVKDGAREMADKLDRFNEISMIMADPPEDV 122

Query: 414 --------------------GGRLRHALSYLQDFLFSPKRARTPVKALSGGEKNRLLLAR 453
                               G  L + L    + L  P  +   V++LSGGEK R+ L R
Sbjct: 123 DFDALMEEMGTLQEQIDAADGWTLDNQLEIAMEALRCPP-SDWSVESLSGGEKRRIALTR 181

Query: 454 ILLKANNLLVLDEPTNDLDIETLELLEELLANYQGTLLLVSHDREFVDNTVTSSWIFEGD 513
           +L++  ++L+LDEPTN LD E++  LE  L  Y G++L+++HDR F+DN V   WI E D
Sbjct: 182 LLIQKPDILLLDEPTNHLDAESVTWLENHLKEYAGSVLMITHDRYFLDNVV--GWILELD 239

Query: 514 -GKIEEFVGGYHDAQQQRAQVLQSRAAENIVKKEKV------VEESPKSAPSKTKQK 563
            GK   + G Y    +++A+ L+    E   +++ +      + + PK   +K+K +
Sbjct: 240 RGKYFPYEGNYSTYLEKKAKRLEQEDREATGRQKAINDELEWIRQGPKGRQTKSKAR 296



 Score = 95.1 bits (235), Expect = 7e-24
 Identities = 77/246 (31%), Positives = 116/246 (47%), Gaps = 47/246 (19%)

Query: 12  AFGDHPLLDHADFALQENERVCLVGRNGAGKSTLMKVLAGEILLDDGKMQVMQDVVVSRL 71
           A+GD  L +   F L     V ++G NGAGKSTL +++ G+   D G++ +   V +  +
Sbjct: 338 AYGDKLLFEDLSFMLPPGGIVGVIGPNGAGKSTLFRIITGKETPDSGEIDIGSTVRLGYV 397

Query: 72  EQ-----DPPRNQAGTVFDYVSGGLQGIGEQLKIYQDQLDLVATDPSESNINKLAHIQEQ 126
           +Q     DP +N    V++ VS G              LD V  +          H    
Sbjct: 398 DQSRDHLDPSKN----VWEEVSDG--------------LDYVKVN---------GHDMST 430

Query: 127 LEVSGAWRF--EDRIKNVLGSLKLDGHTKLTDLSGGWQRKAALARALACDPDVLLLDEPT 184
               GA+ F  +D+ KNV              LSGG + +  +A+ L    +VLLLDEPT
Sbjct: 431 RAYVGAFNFKGQDQQKNV------------GKLSGGERNRVHIAKMLKRGGNVLLLDEPT 478

Query: 185 NHLDVTTIEWLEGFLKDFRGSIIFISHDRAFIKSMATRIVDLD-RGQLSSFPGDYENYLT 243
           N LDV T+  LE  +++F G  + ISHDR F+  +AT I+  +    +  F G++E Y  
Sbjct: 479 NDLDVETLAALEEAIENFAGCAVVISHDRFFLDRLATHILAFEGDSHVEWFEGNFEAYEE 538

Query: 244 EKEEML 249
           +K   L
Sbjct: 539 DKRRRL 544