Pairwise Alignments

Query, 639 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 555 a.a., ADP/ATP ratio sensor and inhibitor of translation from Pseudomonas putida KT2440

 Score =  321 bits (823), Expect = 5e-92
 Identities = 188/530 (35%), Positives = 301/530 (56%), Gaps = 13/530 (2%)

Query: 18  LLDHADFALQENERVCLVGRNGAGKSTLMKVLAGEILLDDGKMQVMQDVVVSRLEQDPPR 77
           +L +   +     ++ ++G NGAGKSTL++++AG     DG+ + M D+ V  L Q+P  
Sbjct: 21  ILKNISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFDGEARPMPDINVGYLPQEPQL 80

Query: 78  NQAGTVFDYVSGGLQGIGEQLKIYQDQLDLV--ATDPSESNINKLAHIQEQLEV----SG 131
           +   TV + V   +  I    K  Q +LD V  A    +++ +KLA  Q +LE     + 
Sbjct: 81  DPTKTVREVVEEAVSVI----KDAQARLDEVYAAYAEPDADFDKLAAEQAKLEAILQAAD 136

Query: 132 AWRFEDRIKNVLGSLKLDG-HTKLTDLSGGWQRKAALARALACDPDVLLLDEPTNHLDVT 190
               E ++     +L+L     ++  LSGG +R+ AL R L   PD+LLLDEPTNHLD  
Sbjct: 137 GHNLERQLDVAADALRLPAWDARIEHLSGGEKRRVALCRLLLSAPDMLLLDEPTNHLDAD 196

Query: 191 TIEWLEGFLKDFRGSIIFISHDRAFIKSMATRIVDLDRGQLSSFPGDYENYLTEKEEMLR 250
           ++ WLE FL DF G+++ I+HDR F+ ++A  I++LDRG    + G+Y  +L  K E L 
Sbjct: 197 SVAWLERFLHDFPGTVVAITHDRYFLDNVAGWILELDRGAGIPYEGNYSGWLEAKSERLA 256

Query: 251 VEELQNAEFDKKLAQEEVWIRQGIKARRTRNEGRVRALKRLRQERSERREVQGKVNLQID 310
            E  Q +  +K + +E  W+R+G KAR+++++ R++  + ++ +  ++R    ++   I 
Sbjct: 257 QESKQQSAHEKAMKEELEWVRKGAKARQSKSKARLQRFEEMQSQEFQKRSETNEI--YIP 314

Query: 311 DSNRSGKIVFEAENLHYSIGGKTIVDGFSFNIMRGDRIALIGPNGCGKSTLLKILLGDLQ 370
              R G  V E +N+    G + ++D  SF++ +G  + +IG NG GKSTL ++L+G  Q
Sbjct: 315 AGPRLGDKVIEFKNVTKGYGDRVLIDNLSFSMPKGAIVGVIGGNGAGKSTLFRMLMGKEQ 374

Query: 371 PDSGKVHCGTKLEVAYFDQYRELLDPEKTVIDNLADGKQEVMVGGRLRHALSYLQDFLFS 430
           PDSG +  G  +++A  DQ RE LD  KTV   ++DG  ++ +G     + +Y+  F F 
Sbjct: 375 PDSGSIEIGETVQLACVDQSREDLDGAKTVFQQISDGSDQIRIGNYEIPSRTYVGRFNFK 434

Query: 431 PKRARTPVKALSGGEKNRLLLARILLKANNLLVLDEPTNDLDIETLELLEELLANYQGTL 490
               +  VK LSGGE+ RL LA  L +  N+L+LDEP+NDLD+ETL  LEE L ++ G  
Sbjct: 435 GGDQQKFVKDLSGGERGRLHLALTLKEGGNVLLLDEPSNDLDVETLRSLEEALLDFPGAA 494

Query: 491 LLVSHDREFVDNTVTSSWIFEGDGKIEEFVGGYHDAQQQRAQVLQSRAAE 540
           +++SHDR F+D   T    +E D  +  F G Y + +  R + L   AA+
Sbjct: 495 IVISHDRWFLDRVATHILAYEDDSNVVFFEGNYTEYEADRKKRLGDAAAQ 544



 Score =  104 bits (260), Expect = 9e-27
 Identities = 93/303 (30%), Positives = 145/303 (47%), Gaps = 51/303 (16%)

Query: 332 KTIVDGFSFNIMRGDRIALIGPNGCGKSTLLKILLGDLQPDSGKVHCGTKLEVAYFDQYR 391
           + I+   S +   G +I ++G NG GKSTLL+I+ G  +   G+      + V Y  Q  
Sbjct: 19  REILKNISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFDGEARPMPDINVGYLPQEP 78

Query: 392 ELLDPEKTV-------------------------------IDNLA--DGKQEVMV----G 414
           + LDP KTV                                D LA    K E ++    G
Sbjct: 79  Q-LDPTKTVREVVEEAVSVIKDAQARLDEVYAAYAEPDADFDKLAAEQAKLEAILQAADG 137

Query: 415 GRLRHALSYLQDFLFSPK-RARTPVKALSGGEKNRLLLARILLKANNLLVLDEPTNDLDI 473
             L   L    D L  P   AR  ++ LSGGEK R+ L R+LL A ++L+LDEPTN LD 
Sbjct: 138 HNLERQLDVAADALRLPAWDAR--IEHLSGGEKRRVALCRLLLSAPDMLLLDEPTNHLDA 195

Query: 474 ETLELLEELLANYQGTLLLVSHDREFVDNTVTSSWIFEGDG----KIEEFVGGYHDAQQQ 529
           +++  LE  L ++ GT++ ++HDR F+DN   + WI E D       E    G+ +A+ +
Sbjct: 196 DSVAWLERFLHDFPGTVVAITHDRYFLDN--VAGWILELDRGAGIPYEGNYSGWLEAKSE 253

Query: 530 R-AQVLQSRAAENIVKKEKV--VEESPKSAPSKTKQKKLSYKLQRELEALPQRLEELEVE 586
           R AQ  + ++A     KE++  V +  K+  SK+K +   ++ + + +   +R E  E+ 
Sbjct: 254 RLAQESKQQSAHEKAMKEELEWVRKGAKARQSKSKARLQRFE-EMQSQEFQKRSETNEIY 312

Query: 587 IAA 589
           I A
Sbjct: 313 IPA 315



 Score =  102 bits (254), Expect = 5e-26
 Identities = 84/266 (31%), Positives = 131/266 (49%), Gaps = 36/266 (13%)

Query: 3   LITIHNGLLAFGDHPLLDHADFALQENERVCLVGRNGAGKSTLMKVLAGEILLDDGKMQV 62
           +I   N    +GD  L+D+  F++ +   V ++G NGAGKSTL ++L G+   D G +++
Sbjct: 323 VIEFKNVTKGYGDRVLIDNLSFSMPKGAIVGVIGGNGAGKSTLFRMLMGKEQPDSGSIEI 382

Query: 63  MQDVVVSRLEQD-PPRNQAGTVFDYVSGGLQGIGEQLKIYQDQLDLVATDPSESNINKLA 121
            + V ++ ++Q     + A TVF  +S G     +Q++I   ++      PS + + +  
Sbjct: 383 GETVQLACVDQSREDLDGAKTVFQQISDG----SDQIRIGNYEI------PSRTYVGRF- 431

Query: 122 HIQEQLEVSGAWRFEDRIKNVLGSLKLDGHTKLTDLSGGWQRKAALARALACDPDVLLLD 181
                              N  G    D    + DLSGG + +  LA  L    +VLLLD
Sbjct: 432 -------------------NFKGG---DQQKFVKDLSGGERGRLHLALTLKEGGNVLLLD 469

Query: 182 EPTNHLDVTTIEWLEGFLKDFRGSIIFISHDRAFIKSMATRIVDL-DRGQLSSFPGDYEN 240
           EP+N LDV T+  LE  L DF G+ I ISHDR F+  +AT I+   D   +  F G+Y  
Sbjct: 470 EPSNDLDVETLRSLEEALLDFPGAAIVISHDRWFLDRVATHILAYEDDSNVVFFEGNYTE 529

Query: 241 YLTEKEEMLRVEELQ-NAEFDKKLAQ 265
           Y  ++++ L     Q +    KKLAQ
Sbjct: 530 YEADRKKRLGDAAAQPHRVRHKKLAQ 555