Pairwise Alignments

Query, 639 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., ABC transporter ATP-binding protein uup from Pseudomonas sp. DMC3

 Score =  622 bits (1603), Expect = 0.0
 Identities = 327/643 (50%), Positives = 441/643 (68%), Gaps = 13/643 (2%)

Query: 1   MALITIHNGLLAFGDHPLLDHADFALQENERVCLVGRNGAGKSTLMKVLAGEILLDDGKM 60
           M L+   +  LAFG  PLLD   + +   ERVC++GRNG GKS++MK++ G+   DDG +
Sbjct: 1   MTLLKFSDVSLAFGAMPLLDKVSWQIARGERVCIIGRNGTGKSSMMKLVKGDQKPDDGSV 60

Query: 61  QVMQDVVVSRLEQDPPRNQAGTVFDYVSGGLQGIGEQLKIYQDQLDLVATDPSESNINKL 120
                + +  L Q+ P     TVFD V+ GL G+G  L  Y      + TD   ++++KL
Sbjct: 61  WRAPGLKIGELPQELPVADDRTVFDVVAEGLDGVGALLAEYHHLSQNIVTD---ADLDKL 117

Query: 121 AHIQEQLEVSGAWRFEDRIKNVLGSLKLDGHTKLTDLSGGWQRKAALARALACDPDVLLL 180
            H+Q  LE    WR +  + + L  L+L     L +LSGGW+R+  LA+AL  +PD+LLL
Sbjct: 118 MHVQHDLEARDGWRLQTLVDSTLSRLQLPADKTLAELSGGWRRRVLLAQALVSEPDLLLL 177

Query: 181 DEPTNHLDVTTIEWLEGFLKDFRGSIIFISHDRAFIKSMATRIVDLDRGQLSSFPGDYEN 240
           DEPTNHLD+  I WLE  LKDF+G+++FI+HDR+F++++ATRI++LDRG L  + GDY +
Sbjct: 178 DEPTNHLDIGAIAWLEEALKDFQGAVLFITHDRSFLQNLATRILELDRGGLIDWNGDYAS 237

Query: 241 YLTEKEEMLRVEELQNAEFDKKLAQEEVWIRQGIKARRTRNEGRVRALKRLRQERSERRE 300
           +L  KE  L  EE  NA FDK+LAQEEVWIRQGIKARRTRNEGRVRALK LR ERSERRE
Sbjct: 238 FLVHKEAALAAEETANALFDKRLAQEEVWIRQGIKARRTRNEGRVRALKALRVERSERRE 297

Query: 301 VQGKVNLQIDDSNRSGKIVFEAENLHYSI-GGKTIVDGFSFNIMRGDRIALIGPNGCGKS 359
             GK N+Q++ +++SGK V   EN+ ++  GG  ++  FS  + RGDRI L+G NG GK+
Sbjct: 298 RTGKANIQLETADKSGKQVMVLENVSFAHPGGPFLIKDFSMVLQRGDRIGLLGANGTGKT 357

Query: 360 TLLKILLGDLQPDSGKVHCGTKLEVAYFDQYRELLDPEKTVIDNLADGKQEVMVGGRLRH 419
           TLLK++L  LQP SGKV  GT+++VAYFDQ R  LD EKTVIDN+A+G+  + + G+ RH
Sbjct: 358 TLLKLMLSGLQPTSGKVEEGTRIDVAYFDQLRHQLDLEKTVIDNVAEGRDFIDIDGQSRH 417

Query: 420 ALSYLQDFLFSPKRARTPVKALSGGEKNRLLLARILLKANNLLVLDEPTNDLDIETLELL 479
            LSYL DFLFSP+RARTPVKALSGGE+ RLLLA++  K  NLLVLDEPTNDLD+ETLELL
Sbjct: 418 VLSYLGDFLFSPQRARTPVKALSGGERARLLLAKLFSKPANLLVLDEPTNDLDVETLELL 477

Query: 480 EELLANYQGTLLLVSHDREFVDNTVTSSWIFEGDGKIEEFVGGYHDAQQQRAQ-----VL 534
           EE+L  + GT+L+VSHDR F+DN VTS+ +FEG+GK+ E+VGGY D  +Q        V 
Sbjct: 478 EEVLLTFNGTVLMVSHDRAFLDNVVTSTLVFEGEGKVREYVGGYQDWIRQGGSPRLLGVT 537

Query: 535 QSRAAENIVKKEKV-VEESPKSAP---SKTKQKKLSYKLQRELEALPQRLEELEVEIAAL 590
           +S++ +  +    V  E +P +AP   +   +KKLSYKLQRELEALP  ++  E +IAA+
Sbjct: 538 ESKSGKADLNSAVVTAEPAPVAAPAAAAPVAKKKLSYKLQRELEALPGDIDAKEQQIAAV 597

Query: 591 QDIVNSPDFFSQPVDKTQPILDKLTATEQELEIAFERWEELEA 633
           +  +    F+ +P  +T  ++  L   + EL+   ERW EL+A
Sbjct: 598 EAEMAEAGFYQRPPAETAKVIASLEQLQAELDALVERWAELDA 640