Pairwise Alignments

Query, 639 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 555 a.a., energy-dependent translational throttle protein EttA from Pantoea agglomerans CFBP13505 P0401

 Score =  311 bits (797), Expect = 5e-89
 Identities = 179/528 (33%), Positives = 296/528 (56%), Gaps = 9/528 (1%)

Query: 18  LLDHADFALQENERVCLVGRNGAGKSTLMKVLAGEILLDDGKMQVMQDVVVSRLEQDPPR 77
           +L +   +     ++ ++G NGAGKSTL++++AG     +G+ +    + +  L Q+P  
Sbjct: 21  ILKNISLSFFPGAKIGVLGLNGAGKSTLLRIMAGIDKDIEGEARPQPGLKIGYLPQEPQL 80

Query: 78  NQAGTVFDYVSGGLQGIGEQLKIYQDQLDLVATDPSESNINKLA----HIQEQLEVSGAW 133
           N   TV + V   L  +   LK   +   L A + ++   +KLA     ++E ++     
Sbjct: 81  NLEHTVRESVEEALSEVVGALKRLDEVYALYAEEGAD--FDKLAAEQGRLEEIIQAHDGH 138

Query: 134 RFEDRIKNVLGSLKL-DGHTKLTDLSGGWQRKAALARALACDPDVLLLDEPTNHLDVTTI 192
               +++    +L+L D   K+  LSGG +R+ AL R L   PD+LLLDEPTNHLD  ++
Sbjct: 139 NLNTQLERAADALRLPDWDAKIATLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESV 198

Query: 193 EWLEGFLKDFRGSIIFISHDRAFIKSMATRIVDLDRGQLSSFPGDYENYLTEKEEMLRVE 252
            WLE FL DF G+++ I+HDR F+ ++A  I++LDRG+   + G+Y ++L +K+  L  E
Sbjct: 199 AWLERFLHDFEGTVVAITHDRYFLDNVAGWILELDRGEGIPWEGNYSSWLEQKDARLAQE 258

Query: 253 ELQNAEFDKKLAQEEVWIRQGIKARRTRNEGRVRALKRLRQERSERREVQGKVNLQIDDS 312
               A   K + +E  W+R+G K ++++ + R+   + L     ++R    +  L I   
Sbjct: 259 ASSEAARRKSIEKELEWVRKGPKGQQSKGKARLARFEELNNTDYQKRNETNE--LFIPPG 316

Query: 313 NRSGKIVFEAENLHYSIGGKTIVDGFSFNIMRGDRIALIGPNGCGKSTLLKILLGDLQPD 372
            R G  V E  NL  S G + ++D  SF++ +G  + +IGPNG GKSTL +++ G  QPD
Sbjct: 317 ARLGDKVLEVSNLRKSYGDRVLIDDLSFSVPKGAIVGIIGPNGAGKSTLFRMMSGQEQPD 376

Query: 373 SGKVHCGTKLEVAYFDQYRELLDPEKTVIDNLADGKQEVMVGGRLRHALSYLQDFLFSPK 432
           SG++  G  +++A  DQ+R+ +D  KTV + ++ G+  + +G     + +Y+  F F   
Sbjct: 377 SGEIVLGETVKLASVDQFRDSMDNAKTVWEEVSGGQDIMRIGNTEMPSRAYVGRFNFKGV 436

Query: 433 RARTPVKALSGGEKNRLLLARILLKANNLLVLDEPTNDLDIETLELLEELLANYQGTLLL 492
                V  LSGGE+ RL LA++L    N+L+LDEPTNDLDIETL  LE  L  + G  ++
Sbjct: 437 DQGKRVGELSGGERGRLHLAKLLQVGGNMLLLDEPTNDLDIETLRALENALLEFPGCAMV 496

Query: 493 VSHDREFVDNTVTSSWIFEGDGKIEEFVGGYHDAQQQRAQVLQSRAAE 540
           +SHDR F+D   T    ++ +G IE F G + + ++ + + L + A E
Sbjct: 497 ISHDRWFLDRIATHILDYQDEGNIEFFEGNFTEYEEYKKRTLGAEALE 544



 Score =  108 bits (269), Expect = 8e-28
 Identities = 78/256 (30%), Positives = 133/256 (51%), Gaps = 37/256 (14%)

Query: 3   LITIHNGLLAFGDHPLLDHADFALQENERVCLVGRNGAGKSTLMKVLAGEILLDDGKMQV 62
           ++ + N   ++GD  L+D   F++ +   V ++G NGAGKSTL ++++G+   D G++ +
Sbjct: 323 VLEVSNLRKSYGDRVLIDDLSFSVPKGAIVGIIGPNGAGKSTLFRMMSGQEQPDSGEIVL 382

Query: 63  MQDVVVSRLEQ-DPPRNQAGTVFDYVSGGLQGIGEQLKIYQDQLDLVATD-PSESNINKL 120
            + V ++ ++Q     + A TV++ VSGG           QD + +  T+ PS + +   
Sbjct: 383 GETVKLASVDQFRDSMDNAKTVWEEVSGG-----------QDIMRIGNTEMPSRAYV--- 428

Query: 121 AHIQEQLEVSGAWRFEDRIKNVLGSLKLDGHTKLTDLSGGWQRKAALARALACDPDVLLL 180
                     G + F+           +D   ++ +LSGG + +  LA+ L    ++LLL
Sbjct: 429 ----------GRFNFKG----------VDQGKRVGELSGGERGRLHLAKLLQVGGNMLLL 468

Query: 181 DEPTNHLDVTTIEWLEGFLKDFRGSIIFISHDRAFIKSMATRIVDL-DRGQLSSFPGDYE 239
           DEPTN LD+ T+  LE  L +F G  + ISHDR F+  +AT I+D  D G +  F G++ 
Sbjct: 469 DEPTNDLDIETLRALENALLEFPGCAMVISHDRWFLDRIATHILDYQDEGNIEFFEGNFT 528

Query: 240 NYLTEKEEMLRVEELQ 255
            Y   K+  L  E L+
Sbjct: 529 EYEEYKKRTLGAEALE 544