Pairwise Alignments

Query, 639 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 555 a.a., energy-dependent translational throttle protein EttA from Escherichia coli ECRC62

 Score =  323 bits (828), Expect = 1e-92
 Identities = 184/528 (34%), Positives = 301/528 (57%), Gaps = 9/528 (1%)

Query: 18  LLDHADFALQENERVCLVGRNGAGKSTLMKVLAGEILLDDGKMQVMQDVVVSRLEQDPPR 77
           +L +   +     ++ ++G NGAGKSTL++++AG     +G+ +   D+ +  L Q+P  
Sbjct: 21  ILKNISLSFFPGAKIGVLGLNGAGKSTLLRIMAGIDKDIEGEARPQPDIKIGYLPQEPQL 80

Query: 78  NQAGTVFDYVSGGLQGIGEQLKIYQDQLDLVATDPSESNINKLA----HIQEQLEVSGAW 133
           N   TV + +   +  +   LK   +   L A DP +++ +KLA     ++E ++     
Sbjct: 81  NPEHTVRESIEEAVSEVVNALKRLDEVYALYA-DP-DADFDKLAAEQGRLEEIIQAHDGH 138

Query: 134 RFEDRIKNVLGSLKL-DGHTKLTDLSGGWQRKAALARALACDPDVLLLDEPTNHLDVTTI 192
               +++    +L+L D   K+ +LSGG +R+ AL R L   PD+LLLDEPTNHLD  ++
Sbjct: 139 NLNVQLERAADALRLPDWDAKIANLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESV 198

Query: 193 EWLEGFLKDFRGSIIFISHDRAFIKSMATRIVDLDRGQLSSFPGDYENYLTEKEEMLRVE 252
            WLE FL DF G+++ I+HDR F+ ++A  I++LDRG+   + G+Y ++L +K++ L  E
Sbjct: 199 AWLERFLHDFEGTVVAITHDRYFLDNVAGWILELDRGEGIPWEGNYSSWLEQKDQRLAQE 258

Query: 253 ELQNAEFDKKLAQEEVWIRQGIKARRTRNEGRVRALKRLRQERSERREVQGKVNLQIDDS 312
             Q A   K + +E  W+RQG K R+++ + R+   + L     ++R    +  L I   
Sbjct: 259 ASQEAARRKSIEKELEWVRQGTKGRQSKGKARLARFEELNSTEYQKRNETNE--LFIPPG 316

Query: 313 NRSGKIVFEAENLHYSIGGKTIVDGFSFNIMRGDRIALIGPNGCGKSTLLKILLGDLQPD 372
            R G  V E  NL  S G + ++D  SF+I +G  + +IGPNG GKSTL +++ G  QPD
Sbjct: 317 PRLGDKVLEVSNLRKSYGDRLLIDDLSFSIPKGAIVGIIGPNGAGKSTLFRMISGQEQPD 376

Query: 373 SGKVHCGTKLEVAYFDQYRELLDPEKTVIDNLADGKQEVMVGGRLRHALSYLQDFLFSPK 432
           SG +  G  +++A  DQ+R+ +D  KTV + ++ G   + +G     + +Y+  F F   
Sbjct: 377 SGTITLGETVKLASVDQFRDSMDNSKTVWEEVSGGLDIMKIGNTEMPSRAYVGRFNFKGV 436

Query: 433 RARTPVKALSGGEKNRLLLARILLKANNLLVLDEPTNDLDIETLELLEELLANYQGTLLL 492
                V  LSGGE+ RL LA++L    N+L+LDEPTNDLDIETL  LE  L  + G  ++
Sbjct: 437 DQGKRVGELSGGERGRLHLAKLLQVGGNMLLLDEPTNDLDIETLRALENALLEFPGCAMV 496

Query: 493 VSHDREFVDNTVTSSWIFEGDGKIEEFVGGYHDAQQQRAQVLQSRAAE 540
           +SHDR F+D   T    ++ +GK+E F G + + ++ + + L + A E
Sbjct: 497 ISHDRWFLDRIATHILDYQDEGKVEFFEGNFTEYEEYKKRTLGADALE 544



 Score =  107 bits (266), Expect = 2e-27
 Identities = 76/255 (29%), Positives = 134/255 (52%), Gaps = 35/255 (13%)

Query: 3   LITIHNGLLAFGDHPLLDHADFALQENERVCLVGRNGAGKSTLMKVLAGEILLDDGKMQV 62
           ++ + N   ++GD  L+D   F++ +   V ++G NGAGKSTL ++++G+   D G + +
Sbjct: 323 VLEVSNLRKSYGDRLLIDDLSFSIPKGAIVGIIGPNGAGKSTLFRMISGQEQPDSGTITL 382

Query: 63  MQDVVVSRLEQ-DPPRNQAGTVFDYVSGGLQGIGEQLKIYQDQLDLVATDPSESNINKLA 121
            + V ++ ++Q     + + TV++ VSGGL    + +KI   ++      PS + +    
Sbjct: 383 GETVKLASVDQFRDSMDNSKTVWEEVSGGL----DIMKIGNTEM------PSRAYV---- 428

Query: 122 HIQEQLEVSGAWRFEDRIKNVLGSLKLDGHTKLTDLSGGWQRKAALARALACDPDVLLLD 181
                    G + F+           +D   ++ +LSGG + +  LA+ L    ++LLLD
Sbjct: 429 ---------GRFNFKG----------VDQGKRVGELSGGERGRLHLAKLLQVGGNMLLLD 469

Query: 182 EPTNHLDVTTIEWLEGFLKDFRGSIIFISHDRAFIKSMATRIVDL-DRGQLSSFPGDYEN 240
           EPTN LD+ T+  LE  L +F G  + ISHDR F+  +AT I+D  D G++  F G++  
Sbjct: 470 EPTNDLDIETLRALENALLEFPGCAMVISHDRWFLDRIATHILDYQDEGKVEFFEGNFTE 529

Query: 241 YLTEKEEMLRVEELQ 255
           Y   K+  L  + L+
Sbjct: 530 YEEYKKRTLGADALE 544