Pairwise Alignments

Query, 639 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 555 a.a., energy-dependent translational throttle protein EttA from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  333 bits (855), Expect = 9e-96
 Identities = 186/537 (34%), Positives = 306/537 (56%), Gaps = 13/537 (2%)

Query: 14  GDHPLLDHADFALQENERVCLVGRNGAGKSTLMKVLAGEILLDDGKMQVMQDVVVSRLEQ 73
           G   + ++   +   + ++ +VG NG+GKSTL+K++AG     +G+ +    +    LEQ
Sbjct: 18  GGRKIFENIWLSFYNDAKIGVVGVNGSGKSTLLKIMAGLDNEFNGEARAADGIKRGYLEQ 77

Query: 74  DPPRNQAGTVFDYVSGGLQGIGEQLKIYQDQLDLVATDPSESNINKLAH----IQEQLEV 129
           +P  + A  V   V    +      K + ++ + VA +  E+  ++L      +QE+++ 
Sbjct: 78  EPQLDPALNVRQNVEAWCEE-----KQWVNRFNEVAAELGENYTDELMEEMTSLQEKIDA 132

Query: 130 SGAWRFEDRIKNVLGSLKLDGHT-KLTDLSGGWQRKAALARALACDPDVLLLDEPTNHLD 188
              W  + RI   +G+L+      ++T+LSGG +R+ ALAR L   PD+LLLDEPTNHLD
Sbjct: 133 GDVWDIDSRIDQAMGALRCPPDDWEVTNLSGGEKRRVALARLLLSKPDMLLLDEPTNHLD 192

Query: 189 VTTIEWLEGFLKDFRGSIIFISHDRAFIKSMATRIVDLDRGQLSSFPGDYENYLTEKEEM 248
             ++ WL+  L++F G +I ++HDR F+  +    ++LDRG+     G+Y ++L  K + 
Sbjct: 193 AESVAWLQHHLENFPGCVILVTHDRYFLDLVTKWTLELDRGKGHPHEGNYSSWLEAKTKR 252

Query: 249 LRVEELQNAEFDKKLAQEEVWIRQGIKARRTRNEGRVRALKRLRQERSERREVQGKVNLQ 308
           +  E+ ++    + L +E  W+R G KAR+ +++ R+ A +R+ +E+   R  Q   ++Q
Sbjct: 253 VVQEQSESEARQRALTRELEWVRSGAKARQAKSKARLAAYERMVEEQESMRGAQTHAHIQ 312

Query: 309 IDDSNRSGKIVFEAENLHYSIGGKTIVDGFSFNIMRGDRIALIGPNGCGKSTLLKILLGD 368
           I    R G +V E E L  + G KT+ D  +F +     + +IGPNG GKST+ K++ G 
Sbjct: 313 IPPGPRLGNVVLEVEGLQKTYGDKTLFDNLTFKLPPNGIVGVIGPNGAGKSTMFKLITGQ 372

Query: 369 LQPDSGKVHCGTKLEVAYFDQYRELLDPEKTVIDNLADGKQEVMVGGRLRHALSYLQDFL 428
            QPD G +  G  +++AY DQ R+ L P++T+   ++ G   +MVG R  +  +Y+  F 
Sbjct: 373 EQPDGGTIKVGETVKLAYVDQSRDDLKPDETIWQAISGGTDVMMVGKREINTRAYVGSFN 432

Query: 429 FSPKRARTPVKALSGGEKNRLLLARILLKANNLLVLDEPTNDLDIETLELLEELLANYQG 488
           F     +  V  LSGGE+NR+ LA+ L    NL++LDEPTNDLDIETL+ LEE L  + G
Sbjct: 433 FKGGDQQKKVGQLSGGERNRVHLAKTLASGGNLILLDEPTNDLDIETLQNLEEALEEFAG 492

Query: 489 TLLLVSHDREFVDNTVTSSWIFEGDGKIEEFVGGYHDAQQQRAQVLQSRAAENIVKK 545
             +++SHDR F+D   T    FEGDG +E F G +   +Q + + L    A++I+ K
Sbjct: 493 CAVVISHDRWFLDRLATHILAFEGDGHVEWFEGNFEAYEQDKMRRL---GADSIIPK 546



 Score =  104 bits (259), Expect = 1e-26
 Identities = 75/244 (30%), Positives = 123/244 (50%), Gaps = 35/244 (14%)

Query: 13  FGDHPLLDHADFALQENERVCLVGRNGAGKSTLMKVLAGEILLDDGKMQVMQDVVVSRLE 72
           +GD  L D+  F L  N  V ++G NGAGKST+ K++ G+   D G ++V + V ++ ++
Sbjct: 333 YGDKTLFDNLTFKLPPNGIVGVIGPNGAGKSTMFKLITGQEQPDGGTIKVGETVKLAYVD 392

Query: 73  QD-PPRNQAGTVFDYVSGGLQGIGEQLKIYQDQLDLVATDPSESNINKLAHIQEQLEVSG 131
           Q         T++  +SGG               D++     E  IN  A++       G
Sbjct: 393 QSRDDLKPDETIWQAISGG--------------TDVMMVGKRE--INTRAYV-------G 429

Query: 132 AWRFEDRIKNVLGSLKLDGHTKLTDLSGGWQRKAALARALACDPDVLLLDEPTNHLDVTT 191
           ++ F+            D   K+  LSGG + +  LA+ LA   +++LLDEPTN LD+ T
Sbjct: 430 SFNFKGG----------DQQKKVGQLSGGERNRVHLAKTLASGGNLILLDEPTNDLDIET 479

Query: 192 IEWLEGFLKDFRGSIIFISHDRAFIKSMATRIVDLD-RGQLSSFPGDYENYLTEKEEMLR 250
           ++ LE  L++F G  + ISHDR F+  +AT I+  +  G +  F G++E Y  +K   L 
Sbjct: 480 LQNLEEALEEFAGCAVVISHDRWFLDRLATHILAFEGDGHVEWFEGNFEAYEQDKMRRLG 539

Query: 251 VEEL 254
            + +
Sbjct: 540 ADSI 543