Pairwise Alignments

Query, 639 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 608 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

 Score =  451 bits (1161), Expect = e-131
 Identities = 260/635 (40%), Positives = 371/635 (58%), Gaps = 46/635 (7%)

Query: 11  LAFGDHPLLDHADFALQENERVCLVGRNGAGKSTLMKVLAGEILLDDGKMQVMQDVVVSR 70
           L FG  PLLD A+  ++  +R+CLVGRNG+GKSTLMK+ AG +    G++       +  
Sbjct: 13  LTFGVTPLLDGANLQVEPGDRICLVGRNGSGKSTLMKIAAGLVEAQSGEVFRHPAATIRY 72

Query: 71  LEQDPPRNQAGTVFDYVSGGLQGIGEQLKIYQDQLDLVATDPSESNINKLAHIQEQLEVS 130
           LEQ P      TV  Y   GL G G+              DP                  
Sbjct: 73  LEQAPDFAGYATVQAYAEAGL-GPGD--------------DPY----------------- 100

Query: 131 GAWRFEDRIKNVLGSLKLDGHTKLTDLSGGWQRKAALARALACDPDVLLLDEPTNHLDVT 190
                  R+  +L  L L G      LSGG  R+ ALAR +A +PD+L+LDEPTNHLD+ 
Sbjct: 101 -------RVTYLLEHLGLTGQENPESLSGGEARRVALARVMAPEPDILMLDEPTNHLDLP 153

Query: 191 TIEWLEGFLKDFRGSIIFISHDRAFIKSMATRIVDLDRGQLSSFPGDYENYLTEKEEMLR 250
           TIEWLEG L+  R +++ ISHDR F++ ++T  V LDRGQ       + ++   ++++L 
Sbjct: 154 TIEWLEGELQQTRSALVLISHDRRFLEKVSTSTVWLDRGQSRRLNRGFAHFEEWRDKVLE 213

Query: 251 VEELQNAEFDKKLAQEEVWIRQGIKARRTRNEGRVRALKRLRQERSERREVQGKVNLQID 310
            EEL+  +  K + +EE W+R G+ ARR RN  RV  L+ +R +    +  QG V   + 
Sbjct: 214 EEELEQHKLGKAIEREEHWMRYGVTARRKRNMRRVGELQAMRADYRGHKGPQGSVQATVT 273

Query: 311 DSNRSGKIVFEAENLHYSIGGKTIVDGFSFNIMRGDRIALIGPNGCGKSTLLKILLGDLQ 370
           +   SGK+V EA+ +  + G + IV  FS  + RGD I L+GPNG GK+TLLK+L G+L+
Sbjct: 274 EGRESGKLVIEADAISKAYGERVIVAPFSLRVHRGDCIGLVGPNGAGKTTLLKMLTGELE 333

Query: 371 PDSGKVHCGTKLEVAYFDQYRELLDPEKTVIDNLADGK-QEVMVGGRLRHALSYLQDFLF 429
           PDSG V  GT LE+A  DQ RE L+P +T+   L DG+   ++V G ++H   Y++DFLF
Sbjct: 334 PDSGTVKLGTNLEIATLDQKREDLNPNETLAHYLTDGRGDNLLVNGEVKHVTGYMKDFLF 393

Query: 430 SPKRARTPVKALSGGEKNRLLLARILLKANNLLVLDEPTNDLDIETLELLEELLANYQGT 489
            P++ARTP++ LSGGE+ RL+LARIL +  NLL+LDEPTNDLDIETL+LL+E++A + GT
Sbjct: 394 QPEQARTPIRNLSGGERARLILARILARPTNLLILDEPTNDLDIETLDLLQEIVAGFSGT 453

Query: 490 LLLVSHDREFVDNTVTSSWI----FEGDGKIEEFVGGYHDAQQQRAQVL-QSRAAENIVK 544
           ++LVSHDR+F+D TVTS+       + DG+  E+ GGY D   QR     + R AE   K
Sbjct: 454 VILVSHDRDFLDRTVTSTIAPANPDQPDGRWIEYAGGYSDMMAQRKGAADEKRKAERQEK 513

Query: 545 KEKVVEESPKSAPSKTKQKKLSYKLQRELEALPQRLEELEVEIAALQDIVNSPDFFSQPV 604
            + V   SP   P+K K  KLS+K +  LE LP+ +E+ + EIA  +  +  P  F++  
Sbjct: 514 AKAVSSASPSQEPAKAK-GKLSFKQKFALENLPKEMEKTQEEIAKREQRMADPQLFAKDQ 572

Query: 605 DKTQPILDKLTATEQELEIAFERWEELEAMQQESE 639
                +  ++    ++LE   E W ELE +++E E
Sbjct: 573 ATFNKLAQEMEKLREKLETMEEEWLELEMLREELE 607



 Score =  107 bits (268), Expect = 1e-27
 Identities = 74/259 (28%), Positives = 131/259 (50%), Gaps = 10/259 (3%)

Query: 319 VFEAENLHYSIGGKTIVDGFSFNIMRGDRIALIGPNGCGKSTLLKILLGDLQPDSGKVHC 378
           + + +++  + G   ++DG +  +  GDRI L+G NG GKSTL+KI  G ++  SG+V  
Sbjct: 5   ILKLDDIKLTFGVTPLLDGANLQVEPGDRICLVGRNGSGKSTLMKIAAGLVEAQSGEVFR 64

Query: 379 GTKLEVAYFDQYRELLDPEKTVIDNLADGKQEVMVGGRLRHALSYLQDFLFSPKRARTPV 438
                + Y +Q      P+      +    +  +  G   + ++YL + L      +   
Sbjct: 65  HPAATIRYLEQ-----APDFAGYATVQAYAEAGLGPGDDPYRVTYLLEHL--GLTGQENP 117

Query: 439 KALSGGEKNRLLLARILLKANNLLVLDEPTNDLDIETLELLEELLANYQGTLLLVSHDRE 498
           ++LSGGE  R+ LAR++    ++L+LDEPTN LD+ T+E LE  L   +  L+L+SHDR 
Sbjct: 118 ESLSGGEARRVALARVMAPEPDILMLDEPTNHLDLPTIEWLEGELQQTRSALVLISHDRR 177

Query: 499 FVDNTVTSS-WIFEGDGKIEEFVGGYHDAQQQRAQVLQSRAAENIVKKEKVVEESPKSAP 557
           F++   TS+ W+  G  +      G+   ++ R +VL+    E     + +  E      
Sbjct: 178 FLEKVSTSTVWLDRGQSR--RLNRGFAHFEEWRDKVLEEEELEQHKLGKAIEREEHWMRY 235

Query: 558 SKTKQKKLSYKLQRELEAL 576
             T ++K + +   EL+A+
Sbjct: 236 GVTARRKRNMRRVGELQAM 254