Pairwise Alignments

Query, 720 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 673 a.a., Efflux ABC transporter, permease/ATP-binding protein Reut_A2584 from Variovorax sp. SCN45

 Score =  286 bits (732), Expect = 2e-81
 Identities = 203/627 (32%), Positives = 322/627 (51%), Gaps = 37/627 (5%)

Query: 115 NKETPEVISSHELNSTWNKKSLVIQQAQSRFDITWFIPEFLQHKRVLSEILLFSFVLQIL 174
           +K TPEVI + + +      +    + QS    TW +    +  +   + L+  FVL ++
Sbjct: 36  SKATPEVIEAADGDDLAGADA----ERQSP-PSTWVLLRLGRFAKPYRKQLILGFVLTLI 90

Query: 175 A----LISPLFFQVVMDKVLV-HQAWSTLDVLVFGLVITGVIEVVLRG-----LREYQYA 224
           +    L+ P     +MD +L+  Q    +D +  GL + G++   L G      R Y  A
Sbjct: 91  STAATLVPPYLTIPLMDDILIPFQNGQKIDTMRVGLYLGGLLVAALVGWGLGWARTYLLA 150

Query: 225 HTANRIDIQLGLKLVQHLFGLPLMFFKSRQVGAIVTRV-RELDTIREFLTGSMFTLTVEL 283
             + RI   L     +HL  LPL +F  ++ G ++ R+  E D I  FL+        ++
Sbjct: 151 LVSERIGADLRTTTYEHLLTLPLDYFGGKRTGDLMARIGSETDRINVFLSLHALDFANDV 210

Query: 284 LFMFVFLYVMSLLSAPLTGLFIATVPCYVLLAWWLTPRMQAAIEKQFSHAAANTSFLTET 343
           L + +   ++  ++  L  + +  +P    +   +  R++   EK     +  T+ L +T
Sbjct: 211 LMIVMTAVILISINPLLAVVTLVPLPFIAWMIHVVRDRLRTGFEKIDRVWSEVTNVLADT 270

Query: 344 VAGSETLKSLAVEPRFIRRWDEQTEKMVTTGYDVQQLNNRSNHL-------VQLLQKITS 396
           + G   +K+ A E R   R+       V   Y++Q +N++ N         V LL +I  
Sbjct: 271 IPGIRVVKAFAQERREAERF------RVANAYNLQ-VNDKLNRTWSLFTPTVSLLTEIGL 323

Query: 397 VAILWLGATEVLSLEMTIGQLIAFNMMTNHIAQPLARMVELWGQFIQTRVAIEKLGDML- 455
           + +   G  +V    +T+G L AF          L  M  +     +     +++ D+L 
Sbjct: 324 LVVWAFGIWQVARGSITVGVLTAFIAYIGRFYTRLDSMSRIVSVTQKAAAGAKRIFDILD 383

Query: 456 ---NLPVEQHTGSDNVTISGAISFKNILFRYQPDIPPTINDLSLDIRAGETLGVVGTSGS 512
              N+P E         + G I    + FRY       I+DL L I  GE +G+VG SGS
Sbjct: 384 HVSNVP-EPANPVKVERVQGRIEMSGLGFRYGSRA--VIHDLDLVIEPGEMIGLVGHSGS 440

Query: 513 GKSTLARLLLRLYSPEQGSITIDGIPLNHINVQQLRQRVGVVLQENFLFHKSVSENIAQS 572
           GKSTL  L+ R Y    G+I +DG  +    V   R+ VG+VLQE FLF  ++++NIA  
Sbjct: 441 GKSTLVNLICRFYDVTDGAIKVDGTDIRRFAVADYRRHVGLVLQEPFLFFGTIAQNIAYG 500

Query: 573 KPEASLEEIIEAAKLSGAHDFILKLPMGYDTVLAEGGQSLSGGQRQRLAIARTLLSDPKV 632
           KP+A+ EEI+ AA+ + AHDFIL+L  GYD+++ E GQ LSGG+RQR++IAR LL DP++
Sbjct: 501 KPDATREEIVAAARAAHAHDFILRLQHGYDSLVGERGQGLSGGERQRISIARALLIDPRI 560

Query: 633 LILDEATSALDDESQAVIQANMASIARGRTVITIAHRLSTVRDCDRIIVLHQGTIVEQGS 692
           LILDEATSA+D E++  IQ  + ++ +GRT I IAHRLST+R  DR++V+ +G +VE G 
Sbjct: 561 LILDEATSAVDTETEKEIQKALDNLVQGRTTIAIAHRLSTLRKADRLVVMDRGEVVEVGP 620

Query: 693 HQQLLAYGKQYKQLWQLQQELKQEEAS 719
           H  L+A    Y +L+Q Q     ++AS
Sbjct: 621 HDALMAKQGAYWRLYQAQLRQGDDDAS 647