Pairwise Alignments

Query, 720 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 610 a.a., Efflux ABC transporter, permease/ATP-binding protein mlr7818 from Variovorax sp. SCN45

 Score =  256 bits (655), Expect = 2e-72
 Identities = 159/499 (31%), Positives = 264/499 (52%), Gaps = 6/499 (1%)

Query: 218 LREYQYAHTANRIDIQLGLKLVQHLFGLPLMFFKSRQVGAIVTRV-RELDTIREFLTGSM 276
           LRE  +A        Q+ L++  HL  L L F   RQ G +   + R    +   ++ S+
Sbjct: 106 LRELIFAKATEGTARQIALEVFGHLHSLSLRFHLERQTGGMTRDIERGTRGVHSLISMSL 165

Query: 277 FTLTVELLFMFVFLYVMSL-LSAPLTGLFIATVPCYVLLAWWLTPRMQAAIEKQFSHAAA 335
           +++   ++ + + L ++ +   +    + +A +  Y+     +T       +      + 
Sbjct: 166 YSIVPTIIELVLVLCILGVKFDSLFVWITLAALVLYITFTVTVTEWRTQFRKTMNELDSM 225

Query: 336 NTSFLTETVAGSETLKSLAVEPRFIRRWDEQTEKMVTTGYDVQQLNNRSNHLVQLLQKIT 395
             S   +++   ET+K    E    +R+D   ++        Q+  +  N   Q L  I+
Sbjct: 226 AQSRAVDSLLNYETVKYFNNEEFEAKRYDASLDRYRKAAIKSQRTLSMLNTGQQALIAIS 285

Query: 396 SVAILWLGATEVLSLEMTIGQLIAFNMMTNHIAQPLARMVELWGQFIQTRVAIEKLGDML 455
            V +LW   + V+   MT+G L+  N     +  PL  +  ++ +  Q+   ++K+  ++
Sbjct: 286 LVLMLWRATSGVVDGRMTLGDLVMVNAFMIQLYIPLNFLGVIYREIKQSLTDLDKMFVLM 345

Query: 456 NLPVEQHTGSDNVTISGA---ISFKNILFRYQPDIPPTINDLSLDIRAGETLGVVGTSGS 512
               E     +   ++G    + F+++ F Y+P   P +  +S +I AG+T+ VVG SGS
Sbjct: 346 EKEREVRDAPEAQPLAGTDSTVRFEDVSFAYEP-ARPILKHVSFEIPAGKTVAVVGPSGS 404

Query: 513 GKSTLARLLLRLYSPEQGSITIDGIPLNHINVQQLRQRVGVVLQENFLFHKSVSENIAQS 572
           GKSTLARLL R Y  + G ITI G  +  +    +R+ +G+V Q+  LF+ +V  NIA  
Sbjct: 405 GKSTLARLLYRFYDVQHGHITIGGEDIRDVTQSSVRRAIGIVPQDTVLFNDTVEYNIAYG 464

Query: 573 KPEASLEEIIEAAKLSGAHDFILKLPMGYDTVLAEGGQSLSGGQRQRLAIARTLLSDPKV 632
           +P A+ EE+  AA+ +  HDFI   P GY+T + E G  LSGG++QR+AIARTLL +P +
Sbjct: 465 RPGATREEVEAAARAARIHDFISATPKGYETTVGERGLKLSGGEKQRVAIARTLLKNPPI 524

Query: 633 LILDEATSALDDESQAVIQANMASIARGRTVITIAHRLSTVRDCDRIIVLHQGTIVEQGS 692
           +I DEATSALD  ++  IQ+ + S A+ +T + IAHRLSTV D   I+VL  G IVE+G+
Sbjct: 525 VIFDEATSALDSANERAIQSELKSAAQDKTTLVIAHRLSTVVDAHEILVLESGVIVERGT 584

Query: 693 HQQLLAYGKQYKQLWQLQQ 711
           H +LLA   +Y Q+W LQ+
Sbjct: 585 HAELLAKQGRYAQMWALQK 603