Pairwise Alignments

Query, 720 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 747 a.a., RTX toxin transporter, ATP-binding protein from Variovorax sp. SCN45

 Score =  578 bits (1491), Expect = e-169
 Identities = 299/627 (47%), Positives = 427/627 (68%), Gaps = 21/627 (3%)

Query: 100 ITAKTNKDKCLIQRPNK-------ETPEVISSHELNSTWNKKSLVIQQAQS------RFD 146
           I A+ +  + L+Q P+        E  EV ++H     W  + ++I    S      +FD
Sbjct: 108 ILAQCDAQRVLLQDPSSSNGRPVIEPLEVFAAH-----WTGELILITSRASLAGDLAKFD 162

Query: 147 ITWFIPEFLQHKRVLSEILLFSFVLQILALISPLFFQVVMDKVLVHQAWSTLDVLVFGLV 206
            +WFIP  ++H+++L E+L  SF+LQ+ AL+SPLFFQVVMDKVLVH+  +TLDVLV GL+
Sbjct: 163 FSWFIPSLVKHRKLLGEVLFISFILQLFALVSPLFFQVVMDKVLVHRGLTTLDVLVIGLL 222

Query: 207 ITGVIEVVLRGLREYQYAHTANRIDIQLGLKLVQHLFGLPLMFFKSRQVGAIVTRVRELD 266
           +  V E +L GLR Y ++HT NRID++LG +L +HL  LPL +F++R+VG  V RVREL+
Sbjct: 223 VVVVFESLLNGLRSYVFSHTTNRIDVELGARLFRHLVQLPLAYFQARRVGDSVARVRELE 282

Query: 267 TIREFLTGSMFTLTVELLFMFVFLYVMSLLSAPLTGLFIATVPCYVLLAWWLTPRMQAAI 326
            IR FLTG+  T+ ++++F  VF+ VM   S PLT + +A++P Y  L+  + P +++ +
Sbjct: 283 NIRSFLTGNALTVLLDVVFSIVFVAVMLFYSVPLTLIVLASMPLYFGLSLAVVPILRSRL 342

Query: 327 EKQFSHAAANTSFLTETVAGSETLKSLAVEPRFIRRWDEQTEKMVTTGYDVQQLNNRSNH 386
           +++F+  A N + L ETV+  +T+K+ A+EP F RRWD Q    ++  +  Q L + +N 
Sbjct: 343 DEKFARGAENQAMLVETVSAIQTVKATALEPAFGRRWDNQLAAYISASFRTQNLASWANE 402

Query: 387 LVQLLQKITSVAILWLGATEVLSLEMTIGQLIAFNMMTNHIAQPLARMVELWGQFIQTRV 446
            V L+ K+ + A LW GA  V++ ++T+GQ +AFNM    ++QP+ RM +LW  F QT +
Sbjct: 403 GVNLIGKLVNAATLWYGAHLVMNNDLTVGQFVAFNMFAQRVSQPIMRMAQLWTDFQQTGI 462

Query: 447 AIEKLGDMLNLPVE--QHTGSDNVTISGAISFKNILFRYQPDIPPTINDLSLDIRAGETL 504
           ++ +LGD+LN   E    T +    + G ++  N+ FRY+P+  P +N +SLD+R GE +
Sbjct: 463 SMARLGDILNTRTEVPPSTAAQLPALKGRVTLDNLTFRYRPEAAPVLNGVSLDVRPGEVI 522

Query: 505 GVVGTSGSGKSTLARLLLRLYSPEQGSITIDGIPLNHINVQQLRQRVGVVLQENFLFHKS 564
           G+VG SGSGKSTL +L+ RLY+PEQG + +DGI ++ I+  QLR +VGVVLQEN LF++S
Sbjct: 523 GIVGRSGSGKSTLTKLIQRLYAPEQGRLLVDGIDISLIDAAQLRMQVGVVLQENTLFNRS 582

Query: 565 VSENIAQSKPEASLEEIIEAAKLSGAHDFILKLPMGYDTVLAEGGQSLSGGQRQRLAIAR 624
           V ENIA   P A LE II AA+L+GAH+FI +LP GYDT++ E G SLSGGQRQR+AIAR
Sbjct: 583 VRENIAIVDPAAPLEAIIHAAQLAGAHEFISELPEGYDTMVGEQGASLSGGQRQRIAIAR 642

Query: 625 TLLSDPKVLILDEATSALDDESQAVIQANMASIARGRTVITIAHRLSTVRDCDRIIVLHQ 684
            L + P+VLI DEATSALD ES+A++Q NMA I RGRTV  IAHRLS VR  +RIIV+ +
Sbjct: 643 ALFTHPRVLIFDEATSALDYESEAIVQRNMAHICRGRTVFIIAHRLSAVRHANRIIVMDK 702

Query: 685 GTIVEQGSHQQLLAYGKQ-YKQLWQLQ 710
           G IVE G+H+ LLA  K  Y  LW +Q
Sbjct: 703 GKIVEGGTHESLLARPKGIYAHLWNMQ 729