Pairwise Alignments

Query, 720 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 625 a.a., ABC transporter ATP-binding protein/permease from Variovorax sp. OAS795

 Score =  258 bits (659), Expect = 6e-73
 Identities = 165/516 (31%), Positives = 269/516 (52%), Gaps = 26/516 (5%)

Query: 218 LREYQYAHTANRIDIQLGLKLVQHLFGLPLMFFKSRQVGAIVTRV-RELDTIREFLTGSM 276
           LRE  +A        Q+ L++  HL  L L F   RQ G +   + R    +   ++ S+
Sbjct: 107 LRELIFAKATEGTARQIALEVFGHLHSLSLRFHLERQTGGMTRDIERGTRGVHSLISMSL 166

Query: 277 FTLTVELLFMFVFLYVMSLLSAPLTGLFI----ATVPCYVLLAWWLTPRMQAAIEKQFSH 332
           +++   ++ + +   V+++L      LF+    A +  Y+     +T       +     
Sbjct: 167 YSIVPTIIELVL---VLTILGVKFDSLFVWITGAALVLYISFTVTVTEWRTQFRKTMNEL 223

Query: 333 AAANTSFLTETVAGSETLKSLAVEPRFIRRWDEQTEKMVTTGYDVQQLNNRSNHLVQLLQ 392
            +   S   +++   ET+K    E    RR+D   ++        Q+  +  N   QL+ 
Sbjct: 224 DSMAQSRAVDSLLNYETVKYFNNEEFEARRYDASLDRYRKAAIKSQRTLSMLNIGQQLII 283

Query: 393 KITSVAILWLGATEVLSLEMTIGQLIAFNMMTNHIAQPLARMVELWGQFIQTRVAIEKLG 452
             + V +LW   + V+   MT+G L+  N     +  PL  +  ++ +  Q+   ++K+ 
Sbjct: 284 ATSLVLMLWRATSGVVEGRMTLGDLVMVNAFMIQLYIPLNFLGVIYREIKQSLTDLDKMF 343

Query: 453 DMLN----------------LPVEQ-HTGSDNVTISGAISFKNILFRYQPDIPPTINDLS 495
            ++                 LP+ +   G +   +   + F+++ F Y+P   P +  +S
Sbjct: 344 VLMEKEREVRDAPGAQPLSLLPLPRGEGGGEGSGVDSTVRFEDVSFAYEP-ARPILKHVS 402

Query: 496 LDIRAGETLGVVGTSGSGKSTLARLLLRLYSPEQGSITIDGIPLNHINVQQLRQRVGVVL 555
            +I AG+T+ VVG SGSGKSTLARLL R Y  +QG ITI G  +  +    +R+ +G+V 
Sbjct: 403 FEIPAGKTVAVVGPSGSGKSTLARLLYRFYDVQQGRITIGGQDIREVQQSSVRRAIGIVP 462

Query: 556 QENFLFHKSVSENIAQSKPEASLEEIIEAAKLSGAHDFILKLPMGYDTVLAEGGQSLSGG 615
           Q+  LF+ +V  NIA  +P AS EE+  AA+ +  HDFI   P+GY+T + E G  LSGG
Sbjct: 463 QDTVLFNDTVEYNIAYGRPGASREEVENAARAARIHDFISATPLGYETTVGERGLKLSGG 522

Query: 616 QRQRLAIARTLLSDPKVLILDEATSALDDESQAVIQANMASIARGRTVITIAHRLSTVRD 675
           ++QR+AIARTLL +P ++I DEATSALD  ++  IQ+ + S A+ +T + IAHRLSTV D
Sbjct: 523 EKQRVAIARTLLKNPPIVIFDEATSALDSANERAIQSELKSAAQDKTTLVIAHRLSTVVD 582

Query: 676 CDRIIVLHQGTIVEQGSHQQLLAYGKQYKQLWQLQQ 711
              I+VL  G IVE+G+H +LLA   +Y Q+W LQ+
Sbjct: 583 AHEILVLEAGVIVERGTHAELLAKQGRYAQMWALQK 618