Pairwise Alignments

Query, 720 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 582 a.a., lipid A export ATP-binding/permease MsbA from Vibrio cholerae E7946 ATCC 55056

 Score =  244 bits (623), Expect = 9e-69
 Identities = 163/546 (29%), Positives = 289/546 (52%), Gaps = 18/546 (3%)

Query: 173 ILALISPLFFQVVMDKVLVHQAWSTLDVLVFGLVITGVIEVVLRGLR----EYQYAHTAN 228
           +++L+ PL     +D+   +   + L +L F  +I G++ V  RGL      Y  +  + 
Sbjct: 44  MISLLKPL-----LDEGFGNAESNFLRILPF--MILGLMFV--RGLSGFASSYCLSWVSG 94

Query: 229 RIDIQLGLKLVQHLFGLPLMFFKSRQVGAIVTRVR-ELDTIREFLTGSMFTLTVELLFMF 287
            + +Q+  +L  H   +P+ FF     G +++R+  + + +    + ++ ++  E   + 
Sbjct: 95  NVVMQMRRRLFNHFMHMPVRFFDQESTGGLLSRITYDSEQVAGATSRALVSIVREGASII 154

Query: 288 VFLYVMSLLSAPLTGLFIATVPCYVLLAWWLTPRMQAAIEKQFSHAAANTSFLTETVAGS 347
             L +M   S  L+ + I   P       +++ R +       +     TS   + + G 
Sbjct: 155 GLLTLMFWNSWQLSLVLIVVAPVVAFAISFVSKRFRKISRNMQTAMGHVTSSAEQMLKGH 214

Query: 348 ETLKSLAVEPRFIRRWDEQTEKMVTTGYDVQQLNNRSNHLVQLLQKITSVAILWLGATEV 407
           + + S   +    +R+D+ +  M      +    + ++ ++Q++  +   A+L+L + + 
Sbjct: 215 KVVLSYGGQEVERKRFDKVSNSMRQQTMKLVSAQSIADPVIQMIASLALFAVLFLASVDS 274

Query: 408 LSLEMTIGQL-IAFNMMTNHIAQPLARMVELWGQFIQTRVAIEKLGDMLNLPVEQHTGS- 465
           +  E+T G   + F+ M   + +PL  +  +  +F +   A + L  +++L  E+  G  
Sbjct: 275 IRAELTPGTFTVVFSAMFG-LMRPLKALTSVTSEFQRGMAACQTLFGLMDLETERDNGKY 333

Query: 466 DNVTISGAISFKNILFRYQPDIPPTINDLSLDIRAGETLGVVGTSGSGKSTLARLLLRLY 525
           +   ++G +  K++ F YQ    P ++ +S  I  G+T+ +VG SGSGKST+A L  R Y
Sbjct: 334 EAERVNGEVDVKDVTFTYQGKEKPALSHVSFSIPQGKTVALVGRSGSGKSTIANLFTRFY 393

Query: 526 SPEQGSITIDGIPLNHINVQQLRQRVGVVLQENFLFHKSVSENIAQS-KPEASLEEIIEA 584
             + GSI +DG  +    +  LR+   +V Q   LF+ +++ NIA + + E + E+I +A
Sbjct: 394 DVDSGSICLDGHDVRDYKLTNLRRHFALVSQNVHLFNDTIANNIAYAAEGEYTREQIEQA 453

Query: 585 AKLSGAHDFILKLPMGYDTVLAEGGQSLSGGQRQRLAIARTLLSDPKVLILDEATSALDD 644
           A+ + A +FI  +P G DTV+ E G SLSGGQRQR+AIAR LL D  VLILDEATSALD 
Sbjct: 454 ARQAHAMEFIENMPQGLDTVIGENGTSLSGGQRQRVAIARALLRDAPVLILDEATSALDT 513

Query: 645 ESQAVIQANMASIARGRTVITIAHRLSTVRDCDRIIVLHQGTIVEQGSHQQLLAYGKQYK 704
           ES+  IQA +  + + +TV+ IAHRLST+   D I+V+ +G I+E+G H  LLA    Y 
Sbjct: 514 ESERAIQAALDELQKNKTVLVIAHRLSTIEQADEILVVDEGEIIERGRHADLLAQDGAYA 573

Query: 705 QLWQLQ 710
           QL ++Q
Sbjct: 574 QLHRIQ 579