Pairwise Alignments

Query, 720 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 721 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

 Score =  477 bits (1227), Expect = e-138
 Identities = 270/669 (40%), Positives = 408/669 (60%), Gaps = 13/669 (1%)

Query: 49  SHLTDTENFKEELDKIQKEHKVKIRTKISQFKNIESLKTPAILFDQHDLPFITAKTNKDK 108
           ++LTD E  +E  D +  + ++   TK+S  +   +L  PA++  Q     +  +T+ + 
Sbjct: 56  ANLTDME-MREAADYLGLKSQI---TKLS-IQAFNTLPLPALIEYQGGWK-VMIQTDDNG 109

Query: 109 CLIQRPNKETPEVISSHELNSTWNKKSLVIQQA-----QSRFDITWFIPEFLQHKRVLSE 163
                P  ++   +S     ST + K ++I        + +F ++WF P  L+ K  L +
Sbjct: 110 WTAYDPATDSLHTLSFTSAESTAHYKVMLIADESLSVKEVKFGLSWFAPSILRQKSQLRD 169

Query: 164 ILLFSFVLQILALISPLFFQVVMDKVLVHQAWSTLDVLVFGLVITGVIEVVLRGLREYQY 223
           + L++  LQI AL+SP+ F+ V+DKVLV ++ S+L VL   ++   + E     LR   +
Sbjct: 170 VFLYAIALQIFALVSPMLFENVIDKVLVGRSLSSLHVLALAMLALAIAEPAYSYLRNTVF 229

Query: 224 AHTANRIDIQLGLKLVQHLFGLPLMFFKSRQVGAIVTRVRELDTIREFLTGSMFTLTVEL 283
            H A++++ +L  +L +HL GLPL +FK RQ G I+ RVRE+  IR+FLTGS   L ++L
Sbjct: 230 GHLASQVNAELSGRLYRHLVGLPLTYFKQRQTGQIIARVREMAQIRQFLTGSTLMLLLDL 289

Query: 284 LFMFVFLYVMSLLSAPLTGLFIATVPCYVLLAWWLTPRMQAAIEKQFSHAAANTSFLTET 343
           +F+ VFL VM   ++ LT L I ++  Y +L     P ++  +E ++   A  T+FLTE 
Sbjct: 290 IFVTVFLAVMFHYASTLTWLVIGSLVIYFVLWLIAGPLIRKKVESEYESDANATTFLTEA 349

Query: 344 VAGSETLKSLAVEPRFIRRWDEQTEKMVTTGYDVQQLNNRSNHLVQLLQKITSVAILWLG 403
           V G ET+K+ A E RF+ +W     + +   +D Q+    +   + L+QK+T+  +LW G
Sbjct: 350 VTGIETIKTTATEHRFLEQWQRILSQQLNRSFDAQKSGLIAGQAIALVQKLTAALLLWWG 409

Query: 404 ATEVLSLEMTIGQLIAFNMMTNHIAQPLARMVELWGQFIQTRVAIEKLGDMLNLPVE-QH 462
            + VL  E+T GQL+AFNM+  H+ QP+ R+ ++W  F  T +A+ ++GD+L+ P E   
Sbjct: 410 VSAVLKGEITPGQLVAFNMLAGHVTQPVLRLAQIWQDFQHTLIALRRVGDILDEPRENSK 469

Query: 463 TGSDNV-TISGAISFKNILFRYQPDIPPTINDLSLDIRAGETLGVVGTSGSGKSTLARLL 521
            G  +V  + G I F NI FRY  D P  + +LSL I+ G+ +GV G SGSGKSTL RLL
Sbjct: 470 QGLASVPELDGGIEFSNIRFRYHQDAPEVLANLSLKIKPGQFIGVTGPSGSGKSTLTRLL 529

Query: 522 LRLYSPEQGSITIDGIPLNHINVQQLRQRVGVVLQENFLFHKSVSENIAQSKPEASLEEI 581
            RLY P+ G + +DG+ L   +   LR+ + VVLQE+ LF  SV++NI   KP+AS EEI
Sbjct: 530 QRLYVPQHGQVLVDGMDLAIADPVSLRRNMSVVLQESILFSGSVADNIRLCKPQASDEEI 589

Query: 582 IEAAKLSGAHDFILKLPMGYDTVLAEGGQSLSGGQRQRLAIARTLLSDPKVLILDEATSA 641
             AA+L+GA  FI  LP G++  + E G +LSGGQRQR+A+AR LL +P++L+LDEATSA
Sbjct: 590 RHAAQLAGALAFIEGLPHGFNQPVGEKGAALSGGQRQRIALARALLVNPRILLLDEATSA 649

Query: 642 LDDESQAVIQANMASIARGRTVITIAHRLSTVRDCDRIIVLHQGTIVEQGSHQQLLAYGK 701
           LD  S+A I +NM  I RGRTVI+IAHRL+T+R  D I VL +G + E G+H++LLA   
Sbjct: 650 LDYNSEASIMSNMDEICRGRTVISIAHRLNTIRHADNIFVLDKGQVAESGTHEELLAQQG 709

Query: 702 QYKQLWQLQ 710
            Y +LW  Q
Sbjct: 710 LYAKLWTQQ 718