Pairwise Alignments

Query, 720 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 611 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  243 bits (619), Expect = 3e-68
 Identities = 168/499 (33%), Positives = 266/499 (53%), Gaps = 48/499 (9%)

Query: 240 QHLFGLPLMFFKSRQVGAIVTRVRE-LDTIREFLTGSMFTLTVELLFMFVFLYVMSLLSA 298
           ++L    + FF+    G + T+V +  +++RE +      L +  L +++ +Y++S+L  
Sbjct: 125 RYLLKQSIGFFQRDFAGRVATKVMQNANSVRETV------LKLVDLSVYIAVYMVSMLVM 178

Query: 299 PLTGLFIATVPCYVLLAWWLT------PRMQAAIEKQFSHAAANTSFLTETVAGSETLKS 352
                 I  VP  V L +++       PR++     Q +  +  T  + +T     T+K 
Sbjct: 179 IAEADKILVVPILVWLLFYIAIQVYFVPRLKTISTDQANAQSQMTGRIVDTYTNITTVKL 238

Query: 353 LAVEPR-----------FIRRWDEQTEKMVTTGYDVQQLNNRSNHLVQLLQKITSVAI-L 400
            +   R           F+     Q   + +  Y V  +N        LL  I +++I L
Sbjct: 239 FSHSQRETTYAKSGMKQFLHTVYRQMRTLTSLLYSVDLIN------YLLLFSIAALSIQL 292

Query: 401 WLGATEVLSLEMTIGQLIAFNMMTNHIAQPLARMV--ELWGQFIQTRVAIEKLGDMLN-L 457
           WL  T  + + + IG  IA  M      Q +++ +  E+   F      I+ +  + N +
Sbjct: 293 WLAETVTVGV-IAIGITIALRM------QGMSKWIMWEIRALFESVGTVIDSMNTIANPV 345

Query: 458 PVEQHTGSDNVTIS-GAISFKNILFRYQPDIPPTINDLSLDIRAGETLGVVGTSGSGKST 516
            +E    + ++ +  G +SF  + F Y        +DL+L I+AGE +G+VG SG+GKST
Sbjct: 346 EIEDRPQAKSLQVKFGELSFSQVRFGYSAQ-KTVFDDLNLVIQAGEKVGIVGRSGAGKST 404

Query: 517 LARLLLRLYSPEQGSITIDGIPLNHINVQQLRQRVGVVLQENFLFHKSVSENIAQSKPEA 576
           L  LLLR Y  + G I IDG  ++H++ + LR+ +G++ Q+  L H+S+ +NI    P+A
Sbjct: 405 LVNLLLRFYDVQSGQIRIDGQDISHVSQESLRRHIGMITQDTSLLHRSIRDNILYGNPDA 464

Query: 577 SLEEIIEAAKLSGAHDFILKLP-----MGYDTVLAEGGQSLSGGQRQRLAIARTLLSDPK 631
               I EAA+ + AHDFI +L       GYD  + E G  LSGGQRQR+AIAR LL +  
Sbjct: 465 DQAAIEEAARQAHAHDFIQELQDEQGRTGYDVQVGERGVKLSGGQRQRIAIARVLLKNAP 524

Query: 632 VLILDEATSALDDESQAVIQANMASIARGRTVITIAHRLSTVRDCDRIIVLHQGTIVEQG 691
           +LI+DEATSALD E ++ IQ N+ ++  G+TVI IAHRLST+   DR+IV+ +G IVEQG
Sbjct: 525 ILIMDEATSALDSEVESAIQENLHTLMAGKTVIAIAHRLSTIAAMDRLIVMDEGKIVEQG 584

Query: 692 SHQQLLAYGKQYKQLWQLQ 710
           +HQ+LLA+   Y QLW  Q
Sbjct: 585 THQELLAHKGIYAQLWAHQ 603