Pairwise Alignments

Query, 720 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 731 a.a., Cyclolysin secretion/processing ATP-binding protein CyaB from Pseudomonas putida KT2440

 Score =  591 bits (1524), Expect = e-173
 Identities = 309/638 (48%), Positives = 431/638 (67%), Gaps = 9/638 (1%)

Query: 82  IESLKTPAILFDQHDLPFITAKTNKDKCLIQRPNKETPEVISSHELNSTWNKKSLVIQQ- 140
           ++    PAI  D     FI A+   ++ L+Q P+   P+ ++  EL   W+ + ++++  
Sbjct: 89  LQQTPLPAIAVDTRGEYFIIARVEGEQVLVQDPHSRAPQALTLAELLVRWSGELILVRSD 148

Query: 141 -----AQSRFDITWFIPEFLQHKRVLSEILLFSFVLQILALISPLFFQVVMDKVLVHQAW 195
                  SRFD TWFIP  ++++R+  E+L+ S V+QILAL++PLFFQVVMDKVLVH+  
Sbjct: 149 AQLPLGLSRFDFTWFIPALVKYRRLFGEVLVVSLVIQILALLTPLFFQVVMDKVLVHRGL 208

Query: 196 STLDVLVFGLVITGVIEVVLRGLREYQYAHTANRIDIQLGLKLVQHLFGLPLMFFKSRQV 255
           +TLDV+  GL++  + E +L GLR Y  AHTA+RID++LG KL +HL  LP  +F +R+V
Sbjct: 209 TTLDVIALGLLVVVLFETLLSGLRTYVAAHTASRIDVELGAKLFRHLIDLPTAYFHARRV 268

Query: 256 GAIVTRVRELDTIREFLTGSMFTLTVELLFMFVFLYVMSLLSAPLTGLFIATVPCYVLLA 315
           G  V RVREL+ IR FLT +  TL +++LF  VF+ VM L S  LT + + ++P Y L++
Sbjct: 269 GDSVARVRELENIRSFLTNNSITLVLDVLFSVVFIAVMFLYSGWLTLVVVGSLPFYFLVS 328

Query: 316 WWLTPRMQAAIEKQFSHAAANTSFLTETVAGSETLKSLAVEPRFIRRWDEQTEKMVTTGY 375
             +TP ++A I++ F   A N +FL E V G +TLKS+AVEP+  RRW++Q    V+  +
Sbjct: 329 LVVTPLLRALIDQSFQRGAENQAFLVEAVNGIDTLKSMAVEPQVTRRWNDQLAAYVSASF 388

Query: 376 DVQQLNNRSNHLVQLLQKITSVAILWLGATEVLSLEMTIGQLIAFNMMTNHIAQPLARMV 435
             Q L++ +N  V L+ K+ +VA LWLGA  V+   +T+G+LIAFNM+   ++QP+ R+ 
Sbjct: 389 KTQNLSSLANESVGLIGKLVTVATLWLGARLVIEGALTVGELIAFNMLAGRVSQPIIRLA 448

Query: 436 ELWGQFIQTRVAIEKLGDMLNLPVEQHTGSDNV--TISGAISFKNILFRYQPDIPPTIND 493
           +LW  F QT V+I++LGD+LN   E + G   V  T+ G I    + FRY+PD    + D
Sbjct: 449 QLWTSFQQTGVSIQRLGDILNTRTEVNQGKGTVLPTLVGQIELDRVCFRYRPDGGEVVRD 508

Query: 494 LSLDIRAGETLGVVGTSGSGKSTLARLLLRLYSPEQGSITIDGIPLNHINVQQLRQRVGV 553
           +SL I AGE +GVVG SGSGKSTL RL+ RLYSPE+G +  DG  L   +V  LR+++GV
Sbjct: 509 VSLKIAAGEVIGVVGRSGSGKSTLTRLIQRLYSPERGRVLPDGADLAVADVASLRRQIGV 568

Query: 554 VLQENFLFHKSVSENIAQSKPEASLEEIIEAAKLSGAHDFILKLPMGYDTVLAEGGQSLS 613
           VLQ+N LF ++V ENIA   P A LEE+I AA L+GAH+FIL+LP GY+T++ E G SLS
Sbjct: 569 VLQDNVLFRRTVRENIALGNPAAPLEEVIAAATLAGAHEFILELPDGYETLIGEHGASLS 628

Query: 614 GGQRQRLAIARTLLSDPKVLILDEATSALDDESQAVIQANMASIARGRTVITIAHRLSTV 673
           GGQRQR+AIAR L  +P++LI DEATSALD ES+ +IQ NMA I   RTVI IAHRLS V
Sbjct: 629 GGQRQRIAIARALFGNPRILIFDEATSALDYESERIIQQNMARICAQRTVIIIAHRLSAV 688

Query: 674 RDCDRIIVLHQGTIVEQGSHQQLLAYGK-QYKQLWQLQ 710
           R  DRI+V+ +G I+EQG+H +LL Y +  Y  L QLQ
Sbjct: 689 RHADRIVVMERGQIIEQGTHDELLGYPQGTYAYLHQLQ 726