Pairwise Alignments

Query, 720 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 717 a.a., Type I secretion system ATPase, LssB family LapB from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  254 bits (649), Expect = 1e-71
 Identities = 144/556 (25%), Positives = 301/556 (54%), Gaps = 12/556 (2%)

Query: 149 WFIPEFLQHKRVLSEILLFSFVLQILALISPLFFQVVMDKVLVHQAWSTLDVLVFGLVIT 208
           WF     +H+R+  E +L +F++  + L S L+   V D+V+  + ++TL VL  G ++ 
Sbjct: 121 WFSHALRKHRRIFVEAMLATFIISAVGLTSSLYSMQVYDRVVPTKGYATLWVLTAGALMA 180

Query: 209 GVIEVVLRGLREYQYAHTANRIDIQLGLKLVQHLFGLPL---MFFKSRQVGAIVTRVREL 265
            V+E +++ +R +     +  ID++L        FG  +   M  +   VG   +++R  
Sbjct: 181 IVLEFMMKQVRSHMVDRASKAIDMELS----GVFFGKAMDIRMDARPATVGTFASQIRHF 236

Query: 266 DTIREFLTGSMFTLTVELLFMFVFLYVMSLLSAPLTGLFIATVPCYVLLAWWLTPRMQAA 325
           +++R+F+T S   +  +  F   F+ V++L++ P+  + +A +P  +L+ +     ++  
Sbjct: 237 ESVRQFMTTSTLFILADAPFAVFFVGVIALIAGPVAIVPMAMIPIGMLVGFLFLKPIERL 296

Query: 326 IEKQFSHAAANTSFLTETVAGSETLKSLAVEPRFIRRWDEQTEKMVTTGYDVQQLNNRSN 385
                  +      L E + G E++K+ A E + + R+   +  M      ++ L +R  
Sbjct: 297 SGANMRESNRKNGLLIEAIDGIESIKASAGEWKMLERYQAMSTSMADNELQLRALTSRGT 356

Query: 386 HLVQLLQKITSVAILWLGATEVLSLEMTIGQLIAFNMMTNHIAQPLARMVELWGQFIQTR 445
           ++ Q++Q+++ V ++  GA  + + ++T+G LIA ++++     P+A++ +L  Q+   +
Sbjct: 357 NMAQVIQQLSYVGLIASGAYAITAGDLTMGGLIACSIISGRALAPMAQIPQLIIQWKNAQ 416

Query: 446 VAIEKLGDMLNLPVEQHTGSDNV---TISGAISFKNILFRYQPDIPPTINDLSLDIRAGE 502
           +A++ L  ++ +P ++      V   T  G +    + F Y P   P +   +L+IR GE
Sbjct: 417 IALKALDAIMAMPSDREASQRLVVPETCEGLLRLDKVAFHYNPQ-QPVLTVPALEIRPGE 475

Query: 503 TLGVVGTSGSGKSTLARLLLRLYSPEQGSITIDGIPLNHINVQQLRQRVGVVLQENFLFH 562
            + V+G+ GSGK+TL +LL  LY P +G I +DG+ + H+  + +R+ +G + Q+  LF+
Sbjct: 476 RIAVIGSVGSGKTTLIKLLSGLYHPREGQIFLDGVDVQHLAPEYVREHIGYLPQDVRLFN 535

Query: 563 KSVSENIAQSKPEASLEEIIEAAKLSGAHDFILKLPMGYDTVLAEGGQSLSGGQRQRLAI 622
            ++ EN+    P  S   I+ A +L+G    +   P G +  ++EGG+ LSGGQRQ + +
Sbjct: 536 GTLRENLTLGLPTPSDATILAACQLTGLDLVVQTHPKGLELEISEGGRGLSGGQRQLVGL 595

Query: 623 ARTLLSDPKVLILDEATSALDDESQAVIQANM-ASIARGRTVITIAHRLSTVRDCDRIIV 681
            R L++ PK+L+LDE T+++D + +A +  ++   I+    ++ + H+ + +   +R+IV
Sbjct: 596 TRMLIARPKLLLLDEPTASMDAQLEATVMRHLFEEISPDSALVVVTHKPAVLPRVNRLIV 655

Query: 682 LHQGTIVEQGSHQQLL 697
           + +G I+  G  + ++
Sbjct: 656 VDRGRILLDGPREAVI 671