Pairwise Alignments

Query, 720 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 613 a.a., ABC transporter ATP-binding protein/permease from Magnetospirillum magneticum AMB-1

 Score =  242 bits (617), Expect = 5e-68
 Identities = 168/517 (32%), Positives = 265/517 (51%), Gaps = 40/517 (7%)

Query: 218 LREYQYAHTANRIDIQLGLKLVQHLFGLPLMFFKSRQVGAIVTRVRELDTIREFLTGSMF 277
           LR+  +   A R   ++GL +  HL  L L F   RQ G  V+R  E  T      G  F
Sbjct: 99  LRDIVFVKVAQRAIRKVGLGVFTHLHRLGLRFHLDRQTGG-VSRAIERGT-----KGIEF 152

Query: 278 TLTVELLFMFVFLYVMSLLSAPLTGLF--------IATVPCYVLLAWWLTP---RMQAAI 326
            L   L  +   L  + L++A L GL+          T+  Y+     +T    + + A+
Sbjct: 153 LLNFMLFNILPTLLEIGLVTAILWGLYDGVFALITAVTIAVYIAFTLGVTEWRTKFRRAM 212

Query: 327 EKQFSHAAANTSFLTETVAGSETLKSLAVEPRFIRRWDEQTEKMVTTGYDVQQLNNRSNH 386
            +  S A+       +++   ET+K    E     R+D+   +        +   ++S  
Sbjct: 213 NETDSEASTKA---IDSLLNFETVKYFCNEAHEAGRYDKALARY-------EHAASKSKV 262

Query: 387 LVQLLQKITSVAILWLGATEVLSLE--------MTIGQLIAFNMMTNHIAQPLARMVELW 438
            + LL  +   A++ +G T V+           MT+G  +  N     +  PL  +  ++
Sbjct: 263 TLSLLN-MGQGAVIAVGLTLVMIRAAQGVADGTMTLGDFVLVNSYLIQLYLPLNFLGFVY 321

Query: 439 GQFIQTRVAIEKLGDML--NLPVEQHTGSDNVTISGA-ISFKNILFRYQPDIPPTINDLS 495
            +  Q+   +E +  +L  N  +E   G+  + + G  + F+ + F Y PD    +  + 
Sbjct: 322 REIKQSLTDMESMFRLLRENAEIEDAPGAGPLALQGGEVRFEAVSFGYNPD-RRILGGVD 380

Query: 496 LDIRAGETLGVVGTSGSGKSTLARLLLRLYSPEQGSITIDGIPLNHINVQQLRQRVGVVL 555
             + AG+TL +VG SG+GKST++RLL R Y  ++G I IDG  +  +    LR  +G+V 
Sbjct: 381 FTVPAGKTLAIVGPSGAGKSTISRLLFRFYDVDEGRIVIDGADIRDVTQSSLRAAIGIVP 440

Query: 556 QENFLFHKSVSENIAQSKPEASLEEIIEAAKLSGAHDFILKLPMGYDTVLAEGGQSLSGG 615
           Q+  LF+ ++  NIA  +P AS +EI  AA+L+   DF+  LP GYDT + E G  LSGG
Sbjct: 441 QDTVLFNDTIRYNIAYGRPGASQDEIEAAARLARIDDFVQSLPQGYDTRVGERGLKLSGG 500

Query: 616 QRQRLAIARTLLSDPKVLILDEATSALDDESQAVIQANMASIARGRTVITIAHRLSTVRD 675
           ++QR+AIART+L  P +LI DEATSALD +++  IQ ++  ++R RT + +AHRLSTV D
Sbjct: 501 EKQRVAIARTILKQPAILIFDEATSALDTQTEKEIQESLREVSRNRTTLIVAHRLSTVVD 560

Query: 676 CDRIIVLHQGTIVEQGSHQQLLAYGKQYKQLWQLQQE 712
            D I+VL  G IVE+G H +LL    +Y  +W+ QQE
Sbjct: 561 ADEIVVLEHGRIVERGRHARLLEADGRYAAMWRRQQE 597