Pairwise Alignments

Query, 720 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 711 a.a., peptidase domain-containing ABC transporter from Serratia liquefaciens MT49

 Score =  252 bits (643), Expect = 5e-71
 Identities = 168/551 (30%), Positives = 285/551 (51%), Gaps = 32/551 (5%)

Query: 158 KRVLSEILLFSFVLQILALISPLFFQVVMDKVLVHQAWSTLDVLVFGLVITGVIEVVLRG 217
           K  L+ I  F+  L++ ALI PL  Q+V+D+VLV    S L ++V  +++    + +L  
Sbjct: 167 KAALARIFCFALALEVFALIGPLINQLVIDEVLVALDASLLTLIVIAMLLMAATQTLLEL 226

Query: 218 LREYQYAHTANRIDIQLGLKLVQHLFGLPLMFFKSRQVGAIVTRVRELDTIREFLTGSMF 277
            R++     A   ++Q    +  HL  LP+ +F+SR +G I  +   +DTI++ LT ++ 
Sbjct: 227 ARQWATLTMAVNFNMQWTANVFHHLLRLPINWFESRNMGDISAKFDAVDTIQDTLTTTLL 286

Query: 278 TLTVELLFMFVFLYVMSLLSAPLTGLFIATVPCYVLLAWWLTPRMQAAIEKQFSHAAANT 337
              +++L +   L +M   S  LT + +A    Y LL  +    ++ A +  +      +
Sbjct: 287 EAFLDVLSVLGTLTMMFFYSVKLTLVALAAAMVYGLLRLFWFSTLRKAADDSWVAGTQES 346

Query: 338 SFLTETVAGSETLK-SLAVEPR--------FIRRWDEQTEKMVTTGYDVQQLNNRSNHLV 388
           S   E++ G  +L+ + A+ PR          RR  E  E  +   Y + Q         
Sbjct: 347 SHFLESLRGVLSLRVNGALTPRETVWRNLNVARRNAELRESKLMMVYGIMQT-------- 398

Query: 389 QLLQKITSVAILWLGATEVLSLEMTIGQLIAFNMMTNHIAQPLARMVELWGQFIQTRVAI 448
            ++  +   A+LWLGA  VL+ + ++G L+A+       +  ++ +++    +    V  
Sbjct: 399 -VIGSLVGAAVLWLGAGAVLAGQFSVGMLVAYMSFQGRFSASISGLIDKAVAYKMLDVYN 457

Query: 449 EKLGDMLNLPVE----QHTGSDNVTISG--------AISFKNILFRYQPDIPPTINDLSL 496
           ++L D++    E    Q  G+  + +S         A+S + + F Y       ++ +SL
Sbjct: 458 QRLADIVLTAREDAAAQAAGNSTLLLSASAWPQDRPALSLEQVSFHYAGTESEILSQVSL 517

Query: 497 DIRAGETLGVVGTSGSGKSTLARLLLRLYSPEQGSITIDGIPLNHINVQQLRQRVGVVLQ 556
           DI  GE + +VG SGSGK+TLA+L+L LYSP  G I   GI     +  Q+RQ +GVVLQ
Sbjct: 518 DIMPGEVVALVGASGSGKTTLAKLVLGLYSPTAGMIRTLGIEHRQGDYSQVRQHIGVVLQ 577

Query: 557 ENFLFHKSVSENIAQSKPEASLEEIIEAAKLSGAHDFILKLPMGYDTVLAEGGQSLSGGQ 616
           E+ LF  S++EN++   P    ++++E A+L+     I  LPMGY T++ E G +LS GQ
Sbjct: 578 EDQLFRGSIAENLSFFTPRVDQDKLVECARLAQLDQDIDNLPMGYQTLIGEMGGTLSAGQ 637

Query: 617 RQRLAIARTLLSDPKVLILDEATSALDDESQAVIQANMASIARGRTVITIAHRLSTVRDC 676
           +QRL +AR L   P++LILDEATS LD  ++ +I   +  +  G  ++ IAHR  T+   
Sbjct: 638 KQRLLLARALYKKPRLLILDEATSHLDVNNEMLISHTLRQL--GLPILLIAHRPETIASA 695

Query: 677 DRIIVLHQGTI 687
           DR++ L  G +
Sbjct: 696 DRVVELAAGRL 706