Pairwise Alignments

Query, 720 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 726 a.a., Type I secretion system ATPase, LssB family LapB from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  254 bits (648), Expect = 1e-71
 Identities = 168/608 (27%), Positives = 301/608 (49%), Gaps = 13/608 (2%)

Query: 119 PEVISSHELNSTWNKKSLVIQQAQSRFDITWFIPEFLQHKRVLSEILLFSFVLQILALIS 178
           PE++    L      K   + +  SRF   W     LQ  R    +++ +F++ +L+L  
Sbjct: 126 PEILYVAALRPLSALKDSRVDRYISRFKPDWMRELVLQDIRPYLPVMVAAFLINVLSLAG 185

Query: 179 PLFFQVVMDKVLVHQAWSTLDVLVFGLVITGVIEVVLRGLREYQYAHTANRIDIQLGLKL 238
            +F   V D+V+  Q++ TL VL FG+++  +   +LR  R +       R D+++  ++
Sbjct: 186 IVFSMQVYDRVIPAQSYPTLYVLSFGVLVAVLFGFLLREARTHIMDVLGKRADMRISDRV 245

Query: 239 VQHLFGLPLMFFKSRQVGAIVTRVRELDTIREFLTGSMFTLTVELLFMFVFLYVMSLLSA 298
             H   L       R  G+ ++++REL+ IRE +T S     V+L F F+F+ V+++++ 
Sbjct: 246 FGHALRLRNSAIP-RSTGSFISQLRELEQIREMITSSTLATIVDLPFFFLFMIVLAIIAP 304

Query: 299 PLTGLFIATVPCYVLLAWWLTPRMQAAIEKQFSHAAANTSFLTETVAGSETLKSLAVEPR 358
           PL  +        +L    L  ++     +    A    + L E+V G E +K +  E R
Sbjct: 305 PLAWIAPVAALLMILPGVALQKKLAVLANQAAHEATLRNAVLVESVQGLEDIKLMQAENR 364

Query: 359 FIRRWDEQTEKMVTTGYDVQQLNNRSNHLVQLLQKITSVAILWLGATEVLSLEMTIGQLI 418
           F+++W+        +G   ++L          +Q +   A++  GA  V+   MT G ++
Sbjct: 365 FLQQWNSYIRITGESGLRTRKLTQGLISWGMSVQSLVYAAVIMFGAPMVIEGSMTTGAVV 424

Query: 419 AFNMMTNHIAQPLARMVELWGQFIQTRVAIEKLGDMLNLPVE-QHTGS--DNVTISGAIS 475
           A +M+ + +  P+A +  +  ++ Q + A   L +++ LP E QH  S      + G   
Sbjct: 425 AASMLGSRMIAPMANLCGVLARWQQVKAAKMGLDNIMQLPTETQHDDSLIHRDILHGHYL 484

Query: 476 FKNILFRYQPD---IPPTINDLSLDIRAGETLGVVGTSGSGKSTLARLLLRLYSPEQGSI 532
           F+N  FRY  D   IP  +  + L+I  GE + ++G +G+GKSTL + +       QG  
Sbjct: 485 FENAQFRYHNDDQRIPLRL--VRLEIMPGERIAILGRNGAGKSTLLQAMAGGLEMIQGDA 542

Query: 533 TIDGIPLNHINVQQLRQRVGVVLQENFLFHKSVSENIAQSKPEASLEEIIEAAKLSGAHD 592
            +D + L+HI++  LR+ +G + Q   LF  ++ EN+    P A+ E+I +A ++SG   
Sbjct: 543 RLDNLSLSHIDMADLRRNIGFLSQNARLFFGTLRENLTLGAPHANDEQIFDALEVSGGAV 602

Query: 593 FILKLPMGYDTVLAEGGQSLSGGQRQRLAIARTLLSDPKVLILDEATSALDDESQAVIQA 652
           F+ +L  G D  + EGG  LSGGQRQ L +AR LL  P +++LDE +++LD+ ++     
Sbjct: 603 FVRRLAKGLDHPIMEGGNGLSGGQRQSLLLARMLLRSPNIVLLDEPSASLDEHTEREFIQ 662

Query: 653 NMASIARGRTVITIAHRLSTVRDCDRIIVLHQGTIVEQGSHQQLLAYGKQYKQLWQLQQE 712
            +      RT++   HR+  +   +R++VL +G +V      Q L   +        ++E
Sbjct: 663 RLHQWLGNRTLVVATHRVPILELVERVVVLKEGQLVMDAPKAQALNADRMQSH----RRE 718

Query: 713 LKQEEASA 720
            K E  SA
Sbjct: 719 WKNENQSA 726