Pairwise Alignments

Query, 720 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 732 a.a., type I secretion system ATPase, LssB family from Enterobacter asburiae PDN3

 Score =  262 bits (669), Expect = 5e-74
 Identities = 170/589 (28%), Positives = 303/589 (51%), Gaps = 17/589 (2%)

Query: 143 SRFDITWFIPEFLQHKRVLSEILLFSFVLQILALISPLFFQVVMDKVLVHQAWSTLDVLV 202
           S++   W     ++  R  S ++L +  + +L+L   +F   V D+V+  Q++ TL VL 
Sbjct: 150 SKYRPDWLYRLVMRDLRPYSWVMLAALFINVLSLSGIVFSMQVYDRVIPAQSYPTLYVLT 209

Query: 203 FGLVITGVIEVVLRGLREYQYAHTANRIDIQLGLKLVQHLFGLPLMFFKS---RQVGAIV 259
            G++I  +   VLR  R     H  + +  +  +++   +FG  L    S   R  G+ +
Sbjct: 210 IGVLIATLFGFVLRVAR----GHIMDLLGKRSDMRVSDRVFGHALRLRNSAIPRSTGSFI 265

Query: 260 TRVRELDTIREFLTGSMFTLTVELLFMFVFLYVMSLLSAPLTGLFIATVPCYVL-LAWWL 318
           +++REL+ IRE +T S  +  V+L F  +F+ V++L++  L   +IA V   ++ L   L
Sbjct: 266 SQLRELEQIREMVTSSTISTIVDLPFFLLFVVVLALIAPQLA--WIAPVAAVIMVLPGLL 323

Query: 319 TPRMQAAIEKQFSHAAA-NTSFLTETVAGSETLKSLAVEPRFIRRWDEQTEKMVTTGYDV 377
             +  A + KQ +H +    + L E+V G E +K +  E RF+++W+   +    +G   
Sbjct: 324 LQKKLAELAKQSAHESTLRNAVLVESVQGLEDIKLMQAENRFLQQWNSYIQITAESGLRT 383

Query: 378 QQLNNRSNHLVQLLQKITSVAILWLGATEVLSLEMTIGQLIAFNMMTNHIAQPLARMVEL 437
           ++L          +Q +    ++ +GA  V+   +T G ++A +M+ + +  P+A +  +
Sbjct: 384 RELTQNLISWGMTIQSLVYAGVIVVGAPMVIDGTLTTGSVVAASMLASRMIAPMATLCGV 443

Query: 438 WGQFIQTRVAIEKLGDMLNLPVE---QHTGSDNVTISGAISFKNILFRYQPDIPPTINDL 494
             ++ Q + A E L  ++ LP E   + T      + G   F+   FRYQPD P     +
Sbjct: 444 LARWQQVKAAKEGLDSIMQLPTENQREETPIRQDVLRGHYLFEQAQFRYQPDDPRMALRI 503

Query: 495 S-LDIRAGETLGVVGTSGSGKSTLARLLLRLYSPEQGSITIDGIPLNHINVQQLRQRVGV 553
           + L+IR GE + ++G +G+GKSTL + +        G + +D   L H++V  +R+ VG 
Sbjct: 504 NRLEIRPGEKVAILGRNGAGKSTLLQAMAGGMDLAAGELRLDNFSLPHLDVADVRRNVGF 563

Query: 554 VLQENFLFHKSVSENIAQSKPEASLEEIIEAAKLSGAHDFILKLPMGYDTVLAEGGQSLS 613
           + Q   LF+ ++ ENI    P A+ EEI E  +++GA  F+ +LP G D  + E G  LS
Sbjct: 564 MTQNARLFYGTLRENITLGMPRATDEEIFEVLEMTGAAGFVQRLPKGLDYPIMENGVGLS 623

Query: 614 GGQRQRLAIARTLLSDPKVLILDEATSALDDESQAVIQANMASIARGRTVITIAHRLSTV 673
           GGQRQ + +AR LL DP ++++DE T++LD+ ++      +      RT+I   HR+  +
Sbjct: 624 GGQRQSILLARMLLRDPNIVLMDEPTASLDEHTEREFIQRLGDWLGHRTLIVATHRVPVL 683

Query: 674 RDCDRIIVLHQGTIVEQGSHQQLLAYGKQYKQLWQLQ--QELKQEEASA 720
              +R++VL +G +V      Q L   +  +Q  Q    +E K E  SA
Sbjct: 684 ELVERVVVLKEGMLVMDAPKAQALNNSRMQQQQQQAATGREWKNENQSA 732