Pairwise Alignments

Query, 720 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 583 a.a., lipid A export permease/ATP-binding protein MsbA from Enterobacter asburiae PDN3

 Score =  251 bits (641), Expect = 7e-71
 Identities = 162/539 (30%), Positives = 284/539 (52%), Gaps = 12/539 (2%)

Query: 182 FQVVMDKVLVHQAWSTLD---VLVFGLVITGVIEVVLRGLREYQYAH----TANRIDIQL 234
           F + + K L+   +   D   +L   LV+ G++  +LRG+  Y  ++     + ++ + +
Sbjct: 43  FMLSLLKPLLDDGFGKTDRSVLLWMPLVVIGLM--ILRGITSYISSYCISWVSGKVVMTM 100

Query: 235 GLKLVQHLFGLPLMFFKSRQVGAIVTRVR-ELDTIREFLTGSMFTLTVELLFMFVFLYVM 293
             +L  H+ G+P+ FF  +  G +++R+  + + +    + ++ T+  E   +     +M
Sbjct: 101 RRRLFSHMMGMPVSFFDKQSTGTLLSRITYDSEQVASSSSSALITVVREGASIIGLFAMM 160

Query: 294 SLLSAPLTGLFIATVPCYVLLAWWLTPRMQAAIEKQFSHAAANTSFLTETVAGSETLKSL 353
              S  L+ + I   P   +    ++ R +   +   +     T+   + + G + +   
Sbjct: 161 FYYSWQLSIILIVLAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIF 220

Query: 354 AVEPRFIRRWDEQTEKMVTTGYDVQQLNNRSNHLVQLLQKITSVAILWLGATEVLSLEMT 413
             +    +R+D+ + KM   G  +   ++ S+ ++QL+  +    +L+  +   +   +T
Sbjct: 221 GGQDVETKRFDKVSNKMRLQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMETLT 280

Query: 414 IGQLIAFNMMTNHIAQPLARMVELWGQFIQTRVAIEKLGDMLNLPVEQHTGSDNVT-ISG 472
            G +         + +PL  +  +  QF +   A + L  +L+   E+  G   +   +G
Sbjct: 281 AGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFSILDSEQEKDEGKRVIERANG 340

Query: 473 AISFKNILFRYQPDIPPTINDLSLDIRAGETLGVVGTSGSGKSTLARLLLRLYSPEQGSI 532
            + F+N+ F Y     P + +++L I AG+T+ +VG SGSGKST+A L+ R Y   +G I
Sbjct: 341 DVEFRNVTFTYPGREVPALRNINLSIPAGKTVALVGRSGSGKSTIASLMTRFYDINEGEI 400

Query: 533 TIDGIPLNHINVQQLRQRVGVVLQENFLFHKSVSENIAQSKP-EASLEEIIEAAKLSGAH 591
            +DG  L    +Q LR +V +V Q   LF+ +V+ NIA ++  E S E+I  AA+++ A 
Sbjct: 401 LLDGHDLREYTLQSLRNQVALVSQNVHLFNDTVANNIAYARTDEYSREQIENAARMAYAM 460

Query: 592 DFILKLPMGYDTVLAEGGQSLSGGQRQRLAIARTLLSDPKVLILDEATSALDDESQAVIQ 651
           DFI K+  G DT++ E G  LSGGQRQR+AIAR LL D  +LILDEATSALD ES+  IQ
Sbjct: 461 DFINKMDNGLDTIIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQ 520

Query: 652 ANMASIARGRTVITIAHRLSTVRDCDRIIVLHQGTIVEQGSHQQLLAYGKQYKQLWQLQ 710
           + +  + + RT + IAHRLST+   D I+V+  G IVE+GSH  LL +   Y QL ++Q
Sbjct: 521 SALDELQKNRTSLVIAHRLSTIEQADEIVVVEDGVIVERGSHADLLEHRGVYAQLHKMQ 579