Pairwise Alignments

Query, 720 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 726 a.a., type I secretion system ATPase, LssB family from Enterobacter asburiae PDN3

 Score =  268 bits (686), Expect = 5e-76
 Identities = 169/558 (30%), Positives = 297/558 (53%), Gaps = 6/558 (1%)

Query: 145 FDITWFIPEFLQHKRVLSEILLFSFVLQILALISPLFFQVVMDKVLVHQAWSTLDVLVFG 204
           ++  WF    L+  R  S+I+L + V  +LAL   +F   V D+V+  Q+ +TL VL  G
Sbjct: 142 YEKNWFWQLALKDWRRYSDIMLVALVANVLALSGMVFSMQVYDRVVPSQSEATLWVLFGG 201

Query: 205 LVITGVIEVVLRGLREYQYAHTANRIDIQLGLKLVQHLFGLPLMFFKSRQVGAIVTRVRE 264
           ++I  V E ++R LR +       R D+++  ++  H   +     +S+  G+ + ++RE
Sbjct: 202 VMIAIVFEFIMRMLRVHISDVLGKRADLRISERVFAHALRIK-NGARSKSTGSFIAQIRE 260

Query: 265 LDTIREFLTGSMFTLTVELLFMFVFLYVMSLLSAPLTGLFIATVPCYVLLAWWLTPRMQA 324
           L+++RE +T +      +L F  +F++++ ++  PL  + +  VP  ++    +   +  
Sbjct: 261 LESVRELITSTTIAAISDLPFFLLFVFILWMIGGPLVLVVLLAVPLLLIPGLLVQRPLGK 320

Query: 325 AIEKQFSHAAANTSFLTETVAGSETLKSLAVEPRFIRRWDEQTEKMVTTGYDVQQLNNRS 384
              +    +A   + L E V G E +K +  E RF  +W+   +   + G   + L    
Sbjct: 321 LSSEGMRESAIRNATLVEAVQGIEDIKLMRAEQRFQNQWNNTNDVAASVGMKQRWLTGLL 380

Query: 385 NHLVQLLQKITSVAILWLGATEVLSLEMTIGQLIAFNMMTNHIAQPLARMVELWGQFIQT 444
               Q +Q I    +L +G   V+S +MT G L+  +++ +    PL+++  +  ++   
Sbjct: 381 LTWTQEVQSIVYAVVLLVGCYLVISGDMTTGALVGTSILASRTIAPLSQISGVLSRWQSA 440

Query: 445 RVAIEKLGDMLNLPVEQHTGSDNVT---ISGAISFKNILFRYQPDIPPTINDLS-LDIRA 500
           +VA + L D++  P++       V    + G  + +++ F Y  +   T+ ++S L IRA
Sbjct: 441 KVARKGLDDLMQRPIDDPQHGKKVHKAHLRGDYALEDVGFYYDEEEKLTVLNISKLQIRA 500

Query: 501 GETLGVVGTSGSGKSTLARLLLRLYSPEQGSITIDGIPLNHINVQQLRQRVGVVLQENFL 560
           GE + V+G +GSGKSTL +LL  +  P+QGSI +D I LNH++   +R+ + ++ Q+  L
Sbjct: 501 GERVAVLGRNGSGKSTLLQLLAGMQEPQQGSILLDDIALNHLDPADVRRDMQLLSQQARL 560

Query: 561 FHKSVSENIAQSKPEASLEEIIEAAKLSGAHDFILKLPMGYDTVLAEGGQSLSGGQRQRL 620
           F  SV +NI    P A+ +EI +A   SGA +F+ K  MG + ++ EGG  LSGGQRQ L
Sbjct: 561 FFGSVRDNILMGNPLATDDEIHQALVNSGALEFVRKQKMGLNYIINEGGAGLSGGQRQAL 620

Query: 621 AIARTLLSDPKVLILDEATSALDDESQ-AVIQANMASIARGRTVITIAHRLSTVRDCDRI 679
            +AR L++ P +L+LDE T+ LD+ S+   IQ     + + RT++   HRL  +   DRI
Sbjct: 621 LLARALITSPNILLLDEPTAWLDEMSEKQFIQHLHKWLGKRRTLVVATHRLPILDLVDRI 680

Query: 680 IVLHQGTIVEQGSHQQLL 697
           IVL  G +V  G    +L
Sbjct: 681 IVLENGKVVMDGPRDAIL 698