Pairwise Alignments

Query, 720 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 592 a.a., ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  276 bits (705), Expect = 3e-78
 Identities = 159/553 (28%), Positives = 300/553 (54%), Gaps = 6/553 (1%)

Query: 166 LFSFVLQILA-LISPLFFQVVMDKVLVHQAWSTLDVLVFGLVITGVIEVVLRGLREYQYA 224
           LF  ++  LA L+ P   + +MD+V+ +     L  LV  + +   ++ V         +
Sbjct: 41  LFLIIISRLAGLVLPGASKYLMDEVIPNSNMQLLKWLVIAVGVAVTVQAVTSFALTQILS 100

Query: 225 HTANRIDIQLGLKLVQHLFGLPLMFFKSRQVGAIVTRVR-ELDTIREFLTGSMFTLTVEL 283
             A  +  +L  K+  H+  LP+ FF + + G +V+R+  +++ +R  +   +  +   +
Sbjct: 101 VEAQHLIAKLRAKVQSHIIKLPIRFFDNAKTGELVSRIMTDVEGVRNLVGTGLAQMVGGV 160

Query: 284 LFMFVFLYVMSLLSAPLTGLFIATVPCYVLLAWWLTPRMQAAIEKQFSHAAANTSFLTET 343
           L   + L ++  +S  +T   +  V  + L++     +++    ++    A  T  L ET
Sbjct: 161 LTSVICLGLLIYISPMMTLYVLVPVIIFGLISLKAFGKIRPIFRERGKINAEVTGRLAET 220

Query: 344 VAGSETLKSLAVEPRFIRRWDEQTEKMVTTGYDVQQLNNRSNHLVQLLQKITSVAILWLG 403
           + G   +K    E + ++ ++E   ++           +       LL  + S  I+ +G
Sbjct: 221 LGGIRVIKGFNAEAQEVKTFEEGVLRLYLNIKSSLTTTSMVTSAATLLLGLASAGIMGIG 280

Query: 404 ATEVLSLEMTIGQLIAFNMMTNHIAQPLARMVELWGQFIQTRVAIEKLGDMLNLPVEQHT 463
              ++S E+T G  +AF +    +  P+ +M  +  Q  +    +++  +++N+P+E+  
Sbjct: 281 GYMIMSGELTFGDFLAFTLYLGFMIAPIVQMSNIGSQLTEAFAGLDRTEEIMNIPLEEDE 340

Query: 464 GSDNV---TISGAISFKNILFRYQPDIPPTINDLSLDIRAGETLGVVGTSGSGKSTLARL 520
            S N+   +I G ++F+ + F Y+      + ++S +  AG    +VGTSGSGK+T+A L
Sbjct: 341 KSRNLQLPSIKGDLAFEQVSFAYEEG-KNVVKEVSFEAPAGSMTALVGTSGSGKTTIAGL 399

Query: 521 LLRLYSPEQGSITIDGIPLNHINVQQLRQRVGVVLQENFLFHKSVSENIAQSKPEASLEE 580
           +    +P  G++TIDG  L  +++   R ++GVVLQ++FLF  ++ +NI   +P+A  E+
Sbjct: 400 VASFLNPAGGTVTIDGTDLQQVSLASYRSQLGVVLQDDFLFEGTIRQNILFPRPDARTEQ 459

Query: 581 IIEAAKLSGAHDFILKLPMGYDTVLAEGGQSLSGGQRQRLAIARTLLSDPKVLILDEATS 640
           +++A   +  H+F  +   G DT++ E G  LSGGQ+QR+AIAR +L+DP++LILDEATS
Sbjct: 460 LMQAVYAAHVHEFTDRFEDGLDTLIGERGVKLSGGQKQRIAIARAILADPRILILDEATS 519

Query: 641 ALDDESQAVIQANMASIARGRTVITIAHRLSTVRDCDRIIVLHQGTIVEQGSHQQLLAYG 700
            LD ES+ +IQ ++  + +GRT   IAHRLST+R  D+I+V+ +G IVE+G H++L+   
Sbjct: 520 NLDTESETLIQESLKKLMKGRTSFVIAHRLSTIRQADQILVVEKGEIVERGQHEELMEKR 579

Query: 701 KQYKQLWQLQQEL 713
            +Y +L+  Q  +
Sbjct: 580 GRYFELYTYQARI 592