Pairwise Alignments

Query, 720 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 595 a.a., ABC-type multidrug transport system, ATPase and permease components from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  287 bits (735), Expect = 9e-82
 Identities = 200/580 (34%), Positives = 311/580 (53%), Gaps = 30/580 (5%)

Query: 157 HKRVLSEIL-LFSFVLQ-----ILALISPLF-------FQVVMDKVL---VHQAWSTLDV 200
           +K+ LS+++ +F+FVL      I+ LI  LF       F  V  K++     + W   ++
Sbjct: 17  NKKNLSKLIGIFNFVLPYKGIFIVGLIFLLFSSLTLLAFPYVAGKLIDVAQGKKWMFSNI 76

Query: 201 LVFGLVITGVIEV--VLRGLREYQYAHTANRIDIQLGLKLVQHLFGLPLMFFKSRQVGAI 258
               LV+ G++ V  V    R + +A  + R    + L L   L  LP+ FF  R+ G +
Sbjct: 77  NTIALVLIGILFVQSVFSFFRVWLFALVSERSMRDIRLSLYSRLVNLPMSFFDKRRTGEL 136

Query: 259 VTRVRE----LDTIREFLTGSMFTLTVELLFMFVFLYVMSLLSAPLTGLFIATVPCYVLL 314
           ++R+      L          +F   + LL   VFL+V +     LT   +AT P  V++
Sbjct: 137 ISRITSDVSLLQDTFSVTLAELFRQIITLLAGTVFLFVTT---PRLTLFMLATFPVLVII 193

Query: 315 AWWLTPRMQAAIEKQFSHAAANTSFLTETVAGSETLKSLAVEPRFIRRWDEQTEKMVTTG 374
           A      ++   ++     AA    + ET+    T+KS A E     R+ +   K+V   
Sbjct: 194 AMVFGKFIRKLSKETQDELAAANVIVEETLQSISTVKSFAGEAYEAARYGKGLNKVVKVA 253

Query: 375 YDVQQLNNRSNHLVQLLQKITSVAILWLGATEVLSLEMTIGQLIAFNMMTNHIAQPLARM 434
                        +        VA++W GA  V +  M+IG L++F + T  I   +A +
Sbjct: 254 LKAAGFRGAFISFIIFALFGGIVAVMWYGAMMVSTGAMSIGDLVSFVLYTTFIGGSIAGL 313

Query: 435 VELWGQFIQTRVAIEKLGDMLN-LPVEQHTGSDNVTISGAISFKNILFRYQPDIPPT--I 491
            +++GQ  +   + E++ ++L+  P E       V+I G +SF ++ F Y P  P    +
Sbjct: 314 GDIYGQVQKAIGSSERVLEILDESPEESLADYQEVSIKGNVSFSDVSFNY-PTRPEADVL 372

Query: 492 NDLSLDIRAGETLGVVGTSGSGKSTLARLLLRLYSPEQGSITIDGIPLNHINVQQLRQRV 551
             +++ I++GE + + G SG+GKST+ +LL++ Y+   G ITID  P+ + N++QLR  +
Sbjct: 373 KHINISIQSGEKIALAGHSGAGKSTIIQLLMKFYTINFGEITIDDKPIQNWNLKQLRSNI 432

Query: 552 GVVLQENFLFHKSVSENIAQSKPEASLEEIIEAAKLSGAHDFILKLPMGYDTVLAEGGQS 611
           G+V QE  LF  S+ ENIA +KPEA+ +EIIEAAK + A  FI K P G DT++ E G  
Sbjct: 433 GIVPQEVLLFGGSIRENIAYAKPEATEQEIIEAAKKANAWQFIGKFPEGLDTLVGERGIK 492

Query: 612 LSGGQRQRLAIARTLLSDPKVLILDEATSALDDESQAVIQANMASIARGRTVITIAHRLS 671
           LSGGQRQR+AIAR +L +P +LILDEATS+LD ES+A++Q  +  + + RT I IAHRL+
Sbjct: 493 LSGGQRQRIAIARAILKNPSILILDEATSSLDAESEALVQEALDELMKNRTTIVIAHRLA 552

Query: 672 TVRDCDRIIVLHQGTIVEQGSHQQL-LAYGKQYKQLWQLQ 710
           T+R  DRI V+  G IVE+GSH  L +  G  Y  L +LQ
Sbjct: 553 TIRKVDRIYVMKDGEIVEEGSHDDLAVQKGGFYANLVKLQ 592