Pairwise Alignments

Query, 720 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 606 a.a., putative ABC transporter ATP-binding protein from Alteromonas macleodii MIT1002

 Score =  242 bits (618), Expect = 3e-68
 Identities = 175/578 (30%), Positives = 278/578 (48%), Gaps = 29/578 (5%)

Query: 152 PEFLQHKRVLSEILLFSFVLQILALISPLFFQVVMDKVLVHQAWSTLDVLVFGLVITG-- 209
           P  L+ K  +   LL     ++ ++  P   +  +D +        L V +  +V  G  
Sbjct: 24  PYLLEFKHRVFLALLCLVAAKLASIGLPYVLKYTVDSLNGDLTTLALAVPISLIVAYGTL 83

Query: 210 -VIEVVLRGLREYQYAHTANRIDIQLGLKLVQHLFGLPLMFFKSRQVGAIVTRVRE---- 264
            ++ V+L  +R+  +     R   +LGLK+ +HL  L L F  +R+ G +   +      
Sbjct: 84  RLLNVLLGEVRDTLFGRVTERAMRRLGLKVFKHLHNLDLGFHLNRRTGGLSRDIERGTNG 143

Query: 265 LDTIREFLTGSMFTLTVELLFMFVFLYVMSLLSAPLTGLFIATVPCYVLLAWWLTPRMQA 324
           +  +  F+  ++    +E+  +   L     +S  L  + + +V  Y+  +   T     
Sbjct: 144 VSFLMRFMVFNIVPTLLEITLVVGLLLFQFGVSFAL--IIVVSVVAYIGFSMKATDWRTR 201

Query: 325 AIEKQFSHAAANTSFLTETVAGSETLKSLAVEPRFIRRWDEQTEKMVTTGYDVQQLNNRS 384
            + +     +   S   +++   ET+K    E     R+D        T     +   R 
Sbjct: 202 FVTQMNEADSTTNSRAVDSLLNFETVKYFNNESFEANRYD--------TDLAAWEKARRK 253

Query: 385 NHLVQLLQKITSVAILWLGATE--------VLSLEMTIGQLIAFNMMTNHIAQPLARMVE 436
           N L          AI+ +  T         V++ EMTIG  +  N  T  I  PL  +  
Sbjct: 254 NRLSLFALNGGQAAIIAIAMTSMMANAAFGVMNGEMTIGDFVLINAFTMQIFMPLNFLGF 313

Query: 437 LWGQFIQTRVAIEKLGDML-NLPV--EQHTGSDNVTISGAISFKNILFRYQPDIPPTIND 493
           ++ +   +   I+KL D+L   P   + H  ++    + A+ F N+ F Y  +    +N 
Sbjct: 314 VYREIRGSLANIDKLFDLLAQTPAIKDAHDATELTCANPALRFNNVHFAYTEN-RQILNG 372

Query: 494 LSLDIRAGETLGVVGTSGSGKSTLARLLLRLYSPEQGSITIDGIPLNHINVQQLRQRVGV 553
           LS D+  G  + VVG SG+GKSTL +LL R Y P+QG ITI+G  +  +  Q LR  +G+
Sbjct: 373 LSFDVPPGSKVAVVGESGAGKSTLMKLLFRFYEPQQGDITINGKDIASVTQQSLRSHIGI 432

Query: 554 VLQENFLFHKSVSENIAQSKPEASLEEIIEAAKLSGAHDFILKLPMGYDTVLAEGGQSLS 613
           V Q+  LF+ ++ ENI    P+AS E+I +  KL+    F+  LP   DT + E G  LS
Sbjct: 433 VPQDTVLFNTTLLENIRYGNPDASDEDIKQVIKLAHLEAFVESLPEKLDTTVGERGLKLS 492

Query: 614 GGQRQRLAIARTLLSDPKVLILDEATSALDDESQAVIQANMASIARGRTVITIAHRLSTV 673
           GG++QR++IAR LL    ++I DEATS+LD  S+  I A +   A G T + IAHRLST+
Sbjct: 493 GGEKQRVSIARALLKGAPIMIFDEATSSLDSTSERAILAALRDAAEGHTSLVIAHRLSTI 552

Query: 674 RDCDRIIVLHQGTIVEQGSHQQLLAYGKQYKQLWQLQQ 711
            D D+I+VL  GTIVE+G+H  LL  G +Y  LWQ QQ
Sbjct: 553 VDADKILVLKNGTIVEEGTHTYLLEQGGEYAALWQAQQ 590