Pairwise Alignments

Query, 720 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 587 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  259 bits (661), Expect = 3e-73
 Identities = 172/573 (30%), Positives = 294/573 (51%), Gaps = 21/573 (3%)

Query: 150 FIPEFLQHKRVLSEILLFSFVLQILALISPLFFQVVMDKVLVHQAWSTLDVLVFGLVITG 209
           F   F +H    S  ++   ++     +S    + +++ V + Q +  +  + F +    
Sbjct: 18  FKENFKKHVGWYSAAIVAMLLVAGTTSLSAWIMRDIVNSVYLKQGFDVVLEIAFAVAAIF 77

Query: 210 VIEVVLRGLREYQYAHTANRIDIQLGLKLVQHLFGLPLMFFKSRQVGAIVTRVRE----- 264
           +++ +   ++ Y  +   N I  +   K+   L    + FF++     ++ RV       
Sbjct: 78  IVKGLATFVQSYYLSKAGNSIVAEQQRKIYDRLLKQGVSFFQNLPSSELLVRVTYNAQAA 137

Query: 265 ---LDTIREFLTGSMFTLTVELLFMFVFLYVMSLLSAPLTGLFIATVPCYVLLAWWLTPR 321
              +DTI       +F+L   ++ MF   +++S +S  +  + I +V   +        R
Sbjct: 138 RSVIDTIVTSFVRDLFSLLGLIIVMFAQNFLLSAISMIIGPVAIFSVRLVLR-------R 190

Query: 322 MQAAIEKQFSHAAANTSFLTETVAGSETLKSLAVEPRFIRRWDEQTEKMVTTGYDVQQLN 381
           ++  +E + +      + + ET  G   +K+ ++E    +R ++    +      + +L 
Sbjct: 191 VRKIMEAELASLGEIVNVVQETSIGVRVIKAFSLEKLMRQRMNKAVSDVEHRANGIAKLE 250

Query: 382 NRSNHLVQLLQKITSVAILWLGATEVLSLEMTIGQLIAFN---MMTNHIAQPLARM-VEL 437
             ++ +++ L  +    ++ +    VL    + G L+AF    ++    A+ LARM V++
Sbjct: 251 AATSPIMETLSGLAIAVVIAVSGYTVLEKGGSPGDLMAFITALLLAYEPAKRLARMRVQI 310

Query: 438 WGQFIQTRVAIEKLGDMLNLPVEQHTGSDNVTISGAISFKNILFRYQPDIPPTINDLSLD 497
            G  I  R+  E L   L L  E+         SG +  KN+ F Y  +  P + D+S+ 
Sbjct: 311 EGGMIGVRMMFEVLDAPLTL-AEKKDAQPLPKASGNVELKNVSFEYVAN-QPVLKDVSVL 368

Query: 498 IRAGETLGVVGTSGSGKSTLARLLLRLYSPEQGSITIDGIPLNHINVQQLRQRVGVVLQE 557
              G+   +VG SGSGKST+  L++RLY P+ GS+ I+G+ L  ++   LR+ V  V QE
Sbjct: 369 FEGGKMTALVGPSGSGKSTIINLMMRLYDPQSGSVEINGMDLRDVSFASLREHVSYVGQE 428

Query: 558 NFLFHKSVSENIAQSKPEASLEEIIEAAKLSGAHDFILKLPMGYDTVLAEGGQSLSGGQR 617
            FLF  +V  NI+  +  A+ EEII AAK + AHDFI+ +P GYD+ L E G  LSGGQR
Sbjct: 429 TFLFSGTVKHNISVGRDNATDEEIIAAAKAANAHDFIMNMPDGYDSKLGENGSGLSGGQR 488

Query: 618 QRLAIARTLLSDPKVLILDEATSALDDESQAVIQANMASIARGRTVITIAHRLSTVRDCD 677
           QR+AIAR +L D  +LILDEATSALD ES+A+++  +  +   +T I IAHRLST+   D
Sbjct: 489 QRVAIARAMLRDADILILDEATSALDSESEALVRDALERLTLNKTSIVIAHRLSTINRAD 548

Query: 678 RIIVLHQGTIVEQGSHQQLLAYGKQYKQLWQLQ 710
           +I+V+  G +VEQGS ++LLA    YK+L  +Q
Sbjct: 549 KIVVMDNGQVVEQGSRRELLATDGLYKRLHSIQ 581