Pairwise Alignments

Query, 720 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 577 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

 Score =  251 bits (642), Expect = 5e-71
 Identities = 170/547 (31%), Positives = 283/547 (51%), Gaps = 15/547 (2%)

Query: 173 ILALISPLFFQVVMDKVLVHQAWSTLDVLVFGLVITGVIEVVLRGLREYQYAHTANRIDI 232
           +L L  P+  +  +D +L    W  +     GL++  V+   L     Y        I+ 
Sbjct: 28  VLELGFPMAVKAFVDVLLPGGQWGIILAASVGLLVIYVLNTGLMATVTYWGHMLGINIET 87

Query: 233 QLGLKLVQHLFGLPLMFFKSRQVGAIVTRV-RELDTIREFLTGSMFTLTVELL-FMFVFL 290
            +      HL  L   +F +++ G +V R+ ++L+ I E        L + ++ F+  FL
Sbjct: 88  DMRRLAFDHLQKLSFRYFDNQKTGHLVGRLTKDLEEIGEVAHHGPEDLFIAIMTFIGAFL 147

Query: 291 YVMSLLSAPLTGLFIATVPCYVLLAWWLTPRMQAAIEKQF----SHAAANTSFLTETVAG 346
            +MS+ +  L  +  A VP    +  W+T R    + + F           + + E V G
Sbjct: 148 LMMSV-NVQLALVTAAVVP----VTAWVTSRYGGRMTQNFRALYGRVGDFNARIEENVGG 202

Query: 347 SETLKSLAVEPRFIRRWDEQTEKMVTTGYDVQQLNNRSNHLVQLLQKITSVAILWLGATE 406
              +++ A E      +++  +K   T  D  ++   S  L  +  ++T + ++  GA  
Sbjct: 203 MRVVQAFANEDHERSLFEKDNQKYRRTKLDAYKIMAASTSLSYMSMRLTQMIVMICGAWF 262

Query: 407 VLSLEMTIGQLIAFNMMTNHIAQPLARMVELWGQFIQTRVAIEKLGDMLNLP---VEQHT 463
           VL+  +T G  + F ++     +P+ ++  +   + +      +  ++L+     V+   
Sbjct: 263 VLNGSLTEGGFVGFLLLVGVFFRPVEKINSVIETYPKGIAGFRRFTELLDTAPDIVDAPD 322

Query: 464 GSDNVTISGAISFKNILFRYQPDIPPTINDLSLDIRAGETLGVVGTSGSGKSTLARLLLR 523
             D   +SGAI ++++ F Y       ++++ L I AGET+  VG SG+GK+TL  LL R
Sbjct: 323 AIDAPALSGAIEYRHVGFGYAEG-KRVLDNIDLKISAGETVAFVGPSGAGKTTLCSLLPR 381

Query: 524 LYSPEQGSITIDGIPLNHINVQQLRQRVGVVLQENFLFHKSVSENIAQSKPEASLEEIIE 583
            Y    GSITIDGI +  + +  LR ++G+V Q+ FLF  ++ ENI   +  AS EEI++
Sbjct: 382 FYDVTSGSITIDGIDIRKMKLASLRNQIGIVQQDVFLFGGTIRENIEYGRLGASDEEIMD 441

Query: 584 AAKLSGAHDFILKLPMGYDTVLAEGGQSLSGGQRQRLAIARTLLSDPKVLILDEATSALD 643
           AA+ +     I  +P+G DTV+ E G  LSGGQ+QRLAIAR  L +P +LILDEATSALD
Sbjct: 442 AARRARLDGVIEAMPLGLDTVIGERGVKLSGGQKQRLAIARMFLKNPPILILDEATSALD 501

Query: 644 DESQAVIQANMASIARGRTVITIAHRLSTVRDCDRIIVLHQGTIVEQGSHQQLLAYGKQY 703
            E++  IQ ++  +A+GRT + IAHRL+T+RD  RI+V+ Q  I E G+H +LLA    Y
Sbjct: 502 TETERAIQQSLTELAKGRTTLVIAHRLATIRDASRIVVVDQTGIAETGAHAELLAAKGHY 561

Query: 704 KQLWQLQ 710
            +L + Q
Sbjct: 562 SRLHEAQ 568