Pairwise Alignments

Query, 720 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 628 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

 Score =  253 bits (647), Expect = 2e-71
 Identities = 183/573 (31%), Positives = 293/573 (51%), Gaps = 30/573 (5%)

Query: 166 LFSFVLQILALISPLFFQVVMDKV--------LVHQAWSTLDVLVFGLVITGVIEVVLRG 217
           +F  V +++ +  P FF+   D +        LV         LV    +T +I+V L  
Sbjct: 43  VFLIVAKLVLIAVPYFFKWATDALNGKLDMAGLVPAFLLGAVALVIAYNLTRLIQVGLNQ 102

Query: 218 LREYQYAHTANRIDIQLGLKLVQHLFGLPLMFFKSRQVGAIVTRVRE-----LDTIREFL 272
           LR+  +A        QL  +   H+  L L F   R+ G + +RV E     ++TI  F 
Sbjct: 103 LRDSLFASVGQHAVRQLAYRTFVHMHRLSLRFHLERKTGGL-SRVIERGTKGIETIVRFT 161

Query: 273 TGSMFTLTVELLFMFVFLYVMSLLSAPLTGLFIATVPCYVLLAWWLTPRM---QAAIEKQ 329
             +     +E L   +  +     S  L  + + TV  Y+    W T R    +  I + 
Sbjct: 162 ILNTAPTFIEFLLTAIIFWASYGFSYVL--VTVVTVWAYI----WFTVRASNWRIGIRRA 215

Query: 330 F--SHAAANTSFLTETVAGSETLKSLAVEPRFIRRWDEQTEKMVTTGYDVQQLNNRSNHL 387
              S   ANT  + +++   ET+K    E    RR+D   E+   +   +       N  
Sbjct: 216 MNDSDTDANTKAI-DSLLNFETVKYFGNEEMEARRFDVAMERYEKSAISIWTSLGWLNFG 274

Query: 388 VQLLQKITSVAILWLGATEVLSLEMTIGQLIAFNMMTNHIAQPLARMVELWGQFIQTRVA 447
             ++  I S  ++ + A  V   E TIG  +  N +   ++ PL  +  ++ +  Q    
Sbjct: 275 QGVIFGIGSTIMMVMSALAVQRGEQTIGDFVFVNALLLQLSVPLNFIGFVYREIRQGLTD 334

Query: 448 IEKLGDMLNLPVEQHTGSDNVTIS---GAISFKNILFRYQPDIPPTINDLSLDIRAGETL 504
           IE++ D+L +  E     D   ++   GAISF+++ F Y P+  P +  +S D+ AG+T+
Sbjct: 335 IEQMFDLLEVEAEVTDRPDAKPLAAGPGAISFRDVHFAYDPE-RPILKGVSFDVPAGKTV 393

Query: 505 GVVGTSGSGKSTLARLLLRLYSPEQGSITIDGIPLNHINVQQLRQRVGVVLQENFLFHKS 564
            +VG SG+GKST++RLL R Y  ++G++TIDG  +  +  + LR  +G+V Q+  LF+ +
Sbjct: 394 AIVGPSGAGKSTISRLLYRFYDIQEGAVTIDGQDIRDVTQKSLRSMIGMVPQDTVLFNDT 453

Query: 565 VSENIAQSKPEASLEEIIEAAKLSGAHDFILKLPMGYDTVLAEGGQSLSGGQRQRLAIAR 624
           ++ NI   +P A+ EE+  AA  +    FI KLP GY T++ E G  LSGG++QR+AIAR
Sbjct: 454 LAYNIRYGRPSATDEELKAAADAAQISAFIGKLPDGYATMVGERGLKLSGGEKQRVAIAR 513

Query: 625 TLLSDPKVLILDEATSALDDESQAVIQANMASIARGRTVITIAHRLSTVRDCDRIIVLHQ 684
           T+L  P +LILDEATSALD  ++  IQ+ +  +++ RT + IAHRLSTV   D IIVL +
Sbjct: 514 TILKAPPILILDEATSALDTHTEQEIQSALDIVSKNRTTLVIAHRLSTVIHADEIIVLKE 573

Query: 685 GTIVEQGSHQQLLAYGKQYKQLWQLQQELKQEE 717
           G I E+G+H  L+A+   Y  +W  Q+E  + E
Sbjct: 574 GLIAERGTHASLMAHDGLYASMWSRQREAIRAE 606