Pairwise Alignments

Query, 720 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 618 a.a., Putative multidrug export ATP-binding/permease protein from Acinetobacter radioresistens SK82

 Score =  241 bits (616), Expect = 6e-68
 Identities = 168/484 (34%), Positives = 249/484 (51%), Gaps = 33/484 (6%)

Query: 247 LMFFKSRQVGAIVTRVRELD-TIREF--LTGSMFTLTVELL--FMFVFLYVMSLLSAPLT 301
           L FF +   G +  +V +    +REF  + G M    V        VF+ +  +L  PL 
Sbjct: 130 LDFFHNDFAGRLSAKVMQTALAVREFWVILGDMMAYVVVYFTTISIVFIGISPVLMIPL- 188

Query: 302 GLFIATVPCYVLLAWWLTPRMQAAIEKQFSHAAANTSFLTETVAGSETLKSLAVEPRFIR 361
              +  +  +++ A++  PR+    ++Q    A  T  +T+     +T+K  A   R  R
Sbjct: 189 ---LVWLLLFMIAAYYFIPRLGKVSKQQADARAVMTGRVTDAYTNIQTVKLFAHAGRESR 245

Query: 362 RWDEQTEKMVTTGYDVQQLNNRSNHLVQLLQKITSVAIL------WL-GATEVLSLEMTI 414
              E   + + T Y   +L  +    V +L  +  + +L      W+ G   +  +  T 
Sbjct: 246 YAKESMMEFMVTVYRQMRLGAKFEISVNMLSAVLFLGVLGTAIHLWVEGKAGLGVVAATT 305

Query: 415 GQLIAFNMMTNHIAQPLARMVELWGQFIQTRVAIEKLGDMLNLPVE---QHTGSDNVTIS 471
             ++  N M   I   ++ + E  G        I+     L+ PVE   +         +
Sbjct: 306 AMIMKLNSMAFFIMWQISALFENIG-------TIQDGMGTLSRPVEIQDKKNAKPLKVTA 358

Query: 472 GAISFKNILFRYQPDIPPTINDLSLDIRAGETLGVVGTSGSGKSTLARLLLRLYSPEQGS 531
           G I F N+ F Y       I+ L+L IR GE +G+VG SG+GKSTL +LLLR Y+ + G 
Sbjct: 359 GEIRFDNVSFAYNEK--NVIDQLNLTIRPGEKIGIVGRSGAGKSTLIQLLLRFYTIQNGR 416

Query: 532 ITIDGIPLNHINVQQLRQRVGVVLQENFLFHKSVSENIAQSKPEASLEEIIEAAKLSGAH 591
           I IDG  + ++    LR  + +V Q+  L H+SVSENI   +P+A+ EE+ EA + + A 
Sbjct: 417 ILIDGQDIQNVTQDSLRANIALVTQDTSLLHRSVSENIKYGRPDATDEEMYEAVRKAQAE 476

Query: 592 DFILKLP-----MGYDTVLAEGGQSLSGGQRQRLAIARTLLSDPKVLILDEATSALDDES 646
            FI +L       GYD  + E G  LSGGQRQR+AIAR  L D  +LILDEATSALD E 
Sbjct: 477 TFIPQLTDLGGRRGYDAQVGERGVKLSGGQRQRIAIARVFLKDAPILILDEATSALDSEV 536

Query: 647 QAVIQANMASIARGRTVITIAHRLSTVRDCDRIIVLHQGTIVEQGSHQQLLAYGKQYKQL 706
           +A IQ+++ ++  G+TVI IAHRLST+   DR+IVL QG I EQG+H+QL+     Y QL
Sbjct: 537 EAAIQSSLDALMTGKTVIAIAHRLSTIAQMDRLIVLDQGRIAEQGTHEQLIQQNGIYAQL 596

Query: 707 WQLQ 710
           WQ Q
Sbjct: 597 WQRQ 600