Pairwise Alignments

Query, 467 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 441 a.a., hemolysin D from Pseudomonas simiae WCS417

 Score =  108 bits (270), Expect = 4e-28
 Identities = 109/425 (25%), Positives = 177/425 (41%), Gaps = 34/425 (8%)

Query: 61  LSLGVLAALL-WAYWGKLDVQATATGRLVVSGRSQVIQSYEQSRLLSIHVRDGQRVEKGA 119
           L LG  A  L WA    LD      G+++VSG  + +Q      +  I VRDG  V  G 
Sbjct: 31  LVLGGFAGFLGWAALAPLDKGVAVPGKVMVSGHRKTVQHPAGGIVERIDVRDGDVVSAGQ 90

Query: 120 PLLTLDTLGVNQDITRLVSQ------------AEFQTNELIRYRTLLNDQLLTHDPMFTA 167
            LL L    +   +  L SQ            AE +    IR+        L +DP    
Sbjct: 91  VLLRLKETPLRAQMQSLRSQYLASLASEARLSAESEGLSAIRF-----GPELLNDPEAAG 145

Query: 168 LPAEQQALIHEN---YLSEKNEFDSTLASITAEMKVNRTSQAARQSDIHALLQLTENISQ 224
             + Q+ L +       +E+     T+A   A+++  R SQA++   +H    L E    
Sbjct: 146 TLSLQRQLFNSRAQALATEQQGLRETIAGAEAQLRGTRDSQASK---VHQRAALNE---- 198

Query: 225 RLAARKKLNQVKVIGHVEYLEQEKELLEAQRQVAQQRAELEVLKSQYESLEERLTGFKAQ 284
           +L   ++L +   I     L+ E+   +    +A+    +  L+ Q   L  R+      
Sbjct: 199 QLQGLRELAREGYIPRNRLLDSERLYSQIDGAIAEDYGRIGQLQRQVMELRLRIRQLGED 258

Query: 285 KQREWLEKRRQARLQLASLNQELSKVREREQLEIIRSPVDGTVQQLSVYTLGAVLQPAQN 344
            Q++   +  + R +   L   L+         ++R+P  G V  L VYT G V++P Q 
Sbjct: 259 FQKDLRGQLAETRTRSDDLRNRLASAEFELANSLVRAPASGVVVGLDVYTEGGVIKPGQA 318

Query: 345 LMIIVPENRVQQAEVQILNKDVGFVYPGQSVTVKVDAFPYTRYGTIDAELLSISRDSTTD 404
           LM IVP+      E ++  + V  V+PG  V +   AF  +    +  E+  +S D   D
Sbjct: 319 LMDIVPQGEPLLVEARVPVQMVDKVHPGLPVELMFSAFNQSTTPRVAGEVTLVSADRQVD 378

Query: 405 EQLG---LVFPAQIQLKTNHIMIDGQTVELTPGMSVVAEIKTDKRRVIDYLLSPIQEYQA 461
           E+         AQ+        +DG  V++ PGM V   +KT +R +++YL  P+ +   
Sbjct: 379 ERTDEPYYTLRAQVS-AAGMQQLDG--VQIRPGMPVETFVKTGERSMLNYLFKPLMDRTH 435

Query: 462 EALRE 466
            AL E
Sbjct: 436 MALVE 440