Pairwise Alignments

Query, 467 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., HlyD family type I secretion periplasmic adaptor subunit from Variovorax sp. OAS795

 Score =  105 bits (263), Expect = 2e-27
 Identities = 90/435 (20%), Positives = 188/435 (43%), Gaps = 13/435 (2%)

Query: 43  LALAQRPPSPFARVTALTLSLGVLAALLWAYWGKLDVQATATGRLVVSGRSQVIQSYEQS 102
           LAL  R            L  G+  A  W  +  L     A   + V    + +Q  E  
Sbjct: 14  LALHVREARRLTHWGLAVLVCGLFPAAAWLGFAPLSSAVVAQAHVKVDLNRRPVQHAEGG 73

Query: 103 RLLSIHVRDGQRVEKGAPLLTLDTLGVNQDITRLVSQAEFQTNELIRY---RTLLNDQLL 159
            +  + VRDGQ V +G PLL L  + V+ D  RL  + + +   L R    +T+      
Sbjct: 74  IVREVLVRDGQHVRQGEPLLVLGDVSVDADRNRLDHRVKTERASLARLDAEQTMARAIAF 133

Query: 160 THDPMFTALPAEQQALIHENYLSEKNEFDSTLASITAEMKVNRTSQAARQSDIHAL---- 215
             D + TA    + A   +    E+  F++   ++  ++++ R+ +     +I AL    
Sbjct: 134 PPDVIETAAADPRLAAQLDK---ERALFEARRDALVGQVRLLRSQREKVAEEIVALRAQI 190

Query: 216 LQLTENISQR---LAARKKLNQVKVIGHVEYLEQEKELLEAQRQVAQQRAELEVLKSQYE 272
           +Q +E++  +   L   +KL +   +      + E  + +   ++ ++RAEL   + +  
Sbjct: 191 MQASESMKFQKSDLETNRKLLKDGFVSAARIAQFEGTVADYGVKIEERRAELARAEQRTV 250

Query: 273 SLEERLTGFKAQKQREWLEKRRQARLQLASLNQELSKVREREQLEIIRSPVDGTVQQLSV 332
             + R+   +++ +++  ++ +    +LA + QE  K  +    ++I +P  G +  L  
Sbjct: 251 DADLRIRSLESEYRQQASDQLKVTAARLAEIEQERRKSADASARQVITAPASGEIIDLKY 310

Query: 333 YTLGAVLQPAQNLMIIVPENRVQQAEVQILNKDVGFVYPGQSVTVKVDAFPYTRYGTIDA 392
            T GAV+ P + +  +VP++     + ++  +D+G +  GQ+  ++  AF Y     +  
Sbjct: 311 STPGAVIPPRETIADVVPDDSRLMTDARVRPEDIGRIQRGQAADIRFTAFKYRTTQLVRG 370

Query: 393 ELLSISRDSTTDEQLGLVFPAQIQLKTNHIMIDGQTVELTPGMSVVAEIKTDKRRVIDYL 452
           +++ +S D   D      + + +       +     ++L  GM     ++ ++R  + YL
Sbjct: 371 KVVYVSGDRLIDRATNAPYYSVLVEADPPSLATAGDLKLLAGMPAEIYLQGEERTALQYL 430

Query: 453 LSPIQEYQAEALRER 467
           + PI +    A RER
Sbjct: 431 MEPITQVLRRAARER 445