Pairwise Alignments

Query, 467 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 481 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

 Score =  167 bits (424), Expect = 5e-46
 Identities = 118/435 (27%), Positives = 210/435 (48%), Gaps = 25/435 (5%)

Query: 54  ARVTALTLSLGVLAALLWAYWGKLDVQATATGRLVVSGRSQVIQSYEQSRLLSIHVRDGQ 113
           AR+    +    + A+ WA W ++D      G++V S + QVIQ+ E   +  I VR+G+
Sbjct: 50  ARIILWVMVAFFILAIAWASWAEIDKVTVGQGKVVPSSQVQVIQNLEGGLVKQILVREGE 109

Query: 114 RVEKGAPLLTLDTLGVNQDITRLVSQAEFQTNELIRYRTLLNDQLLTHD----------- 162
           +V+KG  L+ LD      D      Q    T  +++    ++  ++  +           
Sbjct: 110 QVQKGQQLILLDDTRFRSDFREREQQVANLTASVLQLSASISSVIIDENFEEKNWANSVQ 169

Query: 163 ---------PMFTALPAEQQALIHENYLSEKNEFDSTLASITAEMKVNRTSQAARQSDIH 213
                    P+ +    +      + Y  + +   + L+ ++ ++K  +      ++ I 
Sbjct: 170 LDYSKLAFPPVLSDSQPDLVERQRDQYRQDLDNLRNQLSVLSQQIKQKQQDLIEAEARII 229

Query: 214 ALLQLTENISQRLAARKKLNQVKVIGHVEYLEQEKELLEAQRQVAQQRAELEVLKSQY-E 272
            L Q  +   + L   + L    V+  +E L+ +++L + +R++     ++ VLKS   E
Sbjct: 230 NLRQSYDYAKKELDITEPLANEGVVPKIELLKLQRQLNDTRRELTSTELKIPVLKSAVRE 289

Query: 273 SLEERLTGFKAQKQR-EWLEKRRQARLQLASLNQELSKVREREQLEIIRSPVDGTVQQLS 331
           ++  R+    AQK R E  +K  QA+ +L+SL +    + ++    ++ SPV GTV+ L 
Sbjct: 290 AMLSRINA--AQKFRTEQQDKLNQAQDKLSSLTESAVGLEDKVNRTVVVSPVTGTVKTLY 347

Query: 332 VYTLGAVLQPAQNLMIIVPENRVQQAEVQILNKDVGFVYPGQSVTVKVDAFPYTRYGTID 391
           V T+G V+QP  N++ IVP       E QI  +D+ F+ P     VK  A+ +TRYG ++
Sbjct: 348 VNTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIVFLRPDLPAIVKFSAYDFTRYGGLE 407

Query: 392 AELLSISRDSTTDEQLGLVFPAQIQLKTNHIMIDGQTVELTPGMSVVAEIKTDKRRVIDY 451
             L  IS D+T DE+    +  +++ K   +  D Q + + PGM+   +I T KR V+DY
Sbjct: 408 GTLEHISADTTQDEEGNSFYLVRVRTKETTLGHD-QNLPIIPGMTASVDIITGKRTVLDY 466

Query: 452 LLSPIQEYQAEALRE 466
           LL PI   Q+ ALRE
Sbjct: 467 LLKPILSAQSNALRE 481