Pairwise Alignments

Query, 467 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 472 a.a., HlyD family secretion protein from Pseudomonas putida KT2440

 Score =  269 bits (688), Expect = 1e-76
 Identities = 166/437 (37%), Positives = 250/437 (57%), Gaps = 9/437 (2%)

Query: 38  FLPAHLALAQRPPSPFARVTALTLSLGVLAALLWAYWGKLDVQATATGRLVVSGRSQVIQ 97
           FLPA L+L + P  P  R    +L + +  AL WA  G++DV A+A G++V SGRS++IQ
Sbjct: 38  FLPAALSLQETPVHPLPRYLQWSLLMFIGLALAWACIGEIDVIASAEGKIVPSGRSKLIQ 97

Query: 98  SYEQSRLLSIHVRDGQRVEKGAPLLTLDTLGVNQDITRLVSQAEFQTNELIRYRTLLNDQ 157
           + E + + SIHV DGQ V KG  L+ L+      DI RL S+      +  R  TLL+  
Sbjct: 98  ASEVAVVQSIHVVDGQPVRKGDVLVELEGQLTEADIKRLGSELLAAQIDQARASTLLS-- 155

Query: 158 LLTHD-------PMFTALPAEQQALIHENYLSEKNEFDSTLASITAEMKVNRTSQAARQS 210
            L  D       P+     A QQA        +  E  +TL    AE+        + Q 
Sbjct: 156 ALDGDVAPASLAPLIPQATAAQQAGAQRWLEGQYLELQATLEQADAEIGQRAAEIRSAQG 215

Query: 211 DIHALLQLTENISQRLAARKKLNQVKVIGHVEYLEQEKELLEAQRQVAQQRAELEVLKSQ 270
              AL QL     Q  A  K L     +    YLE+E+  LE +R++A QR+ ++ L + 
Sbjct: 216 RADALRQLLVITRQLTADYKLLFSESAVAKHTYLEKEQARLEQERELALQRSRIDELNAA 275

Query: 271 YESLEERLTGFKAQKQREWLEKRRQARLQLASLNQELSKVREREQLEIIRSPVDGTVQQL 330
             + + R +G  AQ +R  L+   +A+ ++A+L QEL+K  +R +L+++ SPVDGTVQQL
Sbjct: 276 RLAAQHRRSGAIAQLRRAMLDLHGEAQRRIATLEQELNKAEQRHRLKVLTSPVDGTVQQL 335

Query: 331 SVYTLGAVLQPAQNLMIIVPENRVQQAEVQILNKDVGFVYPGQSVTVKVDAFPYTRYGTI 390
           +++T G V+ PAQ LM+IVP     + EV++ NKD+GFV+PGQ V VK++ F +TRYG +
Sbjct: 336 AIHTQGGVVTPAQTLMVIVPTGEPVEVEVKVENKDIGFVFPGQHVEVKIETFTFTRYGVV 395

Query: 391 DAELLSISRDSTTDEQLGLVFPAQIQLKTNHIMIDGQTVELTPGMSVVAEIKTDKRRVID 450
              + SIS D+  D++ GL++ A+I+L    + +    + LT GM+V AE+  D+RRVI 
Sbjct: 396 PGVVESISDDAIEDDRHGLLYSARIKLAKEALRVGDNDLPLTAGMAVRAEVIVDRRRVIS 455

Query: 451 YLLSPIQEYQAEALRER 467
           + LSP+Q +  E+L+ER
Sbjct: 456 FFLSPLQRHAKESLKER 472