Pairwise Alignments

Query, 467 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 446 a.a., Metalloprotease secretion protein from Pseudomonas putida KT2440

 Score =  110 bits (275), Expect = 1e-28
 Identities = 107/418 (25%), Positives = 180/418 (43%), Gaps = 31/418 (7%)

Query: 69  LLWAYWGKLDVQATATGRLVVSGRSQVIQSYEQSRLLSIHVRDGQRVEKGAPLLTLDTLG 128
           LLW+    LD    ATG + V+   + +Q      + +I VR+G  V+KG  ++ LD L 
Sbjct: 41  LLWSCLAPLDAGVVATGTVKVTSNRKAVQHLSGGTVEAIMVREGDVVKKGQEVVRLDALR 100

Query: 129 VNQDITRLVSQ---AEFQTNELIRYR-----TLLNDQLLTH---DPMFTALPAEQQALI- 176
              +   L +Q   ++   N L   R        +  LL H   DP   A    QQ L+ 
Sbjct: 101 AVAEQGALSAQYIVSKTVENRLEAERDGRDTVTFDPALLEHYANDPRLLAAMDLQQRLLD 160

Query: 177 --HENYLSEKNEFDSTLASITAEMKVNRTSQAARQSDIHALLQLTENISQRLAARKKLNQ 234
                   E +  +  L +   ++K  +    AR S I  L       +Q L   + L  
Sbjct: 161 TRRAGLAGELSILEENLTASAVQLKGLQQVYGARASQIGFL-------NQELQGTRVLAA 213

Query: 235 VKVIGHVEYLEQEKELLEAQRQVAQQRAELEVLKSQYESLEERLTGFKAQKQREWLEKRR 294
              +     LE E+   +     A+    +   +SQ   ++ R+     Q+Q ++L++  
Sbjct: 214 EGYVPRNRLLELERSNADLSAGQAENLNNIARARSQATEIKLRIL----QRQHDYLKEVE 269

Query: 295 QARLQLASLNQELSKVREREQLEI----IRSPVDGTVQQLSVYTLGAVLQPAQNLMIIVP 350
                 A  N  L+        E+    IRSP+DG VQ LS+ T+G ++QP   +M +VP
Sbjct: 270 SQLTDTAKENTTLADRLRALDYEVTHTVIRSPIDGMVQGLSIATVGGIIQPGAKIMEVVP 329

Query: 351 ENRVQQAEVQILNKDVGFVYPGQSVTVKVDAFPYTRYGTIDAELLSISRDSTTDEQLGLV 410
            ++  Q +  I  + +  + PG +V +   AF + +   I   + +IS D   DE+    
Sbjct: 330 LDQPLQVDAMIPVQAIDKMVPGLAVDIAFPAFNHAQTPNIPGRVKTISADRLLDEESKQP 389

Query: 411 F-PAQIQLKTNHIMIDGQTVELTPGMSVVAEIKTDKRRVIDYLLSPIQEYQAEALRER 467
           F  AQ+++    + + G    + PGM     IKT +R ++ YLL P+ E    A +E+
Sbjct: 390 FYLAQVEVTPAGMGLLGSN-HIRPGMPATVTIKTGERNLLSYLLKPMLERVDAAFKEQ 446