Pairwise Alignments

Query, 467 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 589 a.a., HlyD family type I secretion periplasmic adaptor subunit from Magnetospirillum magneticum AMB-1

 Score =  147 bits (372), Expect = 7e-40
 Identities = 109/445 (24%), Positives = 216/445 (48%), Gaps = 20/445 (4%)

Query: 34  HHYEFLPAHLALAQRPPSPFARVTALTLSLGVLAALLWAYWGKLDVQATATGRLVVSGRS 93
           H  EF     +LA   P P  R  A  +       ++WA+   LD  A A G +V  G+ 
Sbjct: 154 HAPEFGSRLYSLANSYPLPTWRPLARAVMSLTAIFIVWAFVAHLDEVAIAEGEIVPEGKV 213

Query: 94  QVIQSYEQSRLLSIHVRDGQRVEKGAPLLTLD--TLGVNQDITRLVSQAEFQTNELIRYR 151
           +VIQ  E   +  I   DG  V++GAPL+ LD     +N++      + + + +  I  R
Sbjct: 214 KVIQHLEGGVVREIMATDGSEVKEGAPLILLDLPVSSLNKE------ELQARMDGYILQR 267

Query: 152 TLLNDQLLTHDPMFTALPAEQQALIHENYLSEKNEFDSTLASITAEMKVNRTSQAARQSD 211
             L  +L     +F    A++Q  + E   SE+  F++   ++ A + V R     +  +
Sbjct: 268 ARLEAELHDKPVVFPEEEAKRQPGLVE---SERRSFEARRQALNATLTVLRDQVRQKGLE 324

Query: 212 IHALLQLTENIS-------QRLAARKKLNQVKVIGHVEYLEQEKELLEAQRQVAQQRAEL 264
           +      + +I+       +RLA    L +  +   +++++ + ++ + + Q+   RA +
Sbjct: 325 VQEYETKSRSIATSLRLSQERLAMSTDLIKSGLASKMDHVQIQAQVEDLKGQLDSVRASI 384

Query: 265 EVLKSQYESLEERLTGFKAQKQREWLEKRRQARLQLASLNQELSKVREREQLEIIRSPVD 324
              ++  +  + R++   A+ QR    +  +A L +A   +   +  ++++  +I SP+D
Sbjct: 385 PRAEAAQQEAKGRVSEELARFQRTAQSEMSEAELNIARTRELFIQATDQQRRTLISSPID 444

Query: 325 GTVQQLSVYTLGAVLQPAQNLMIIVPENRVQQAEVQILNKDVGFVYPGQSVTVKVDAFPY 384
           G V+ +   T+G V++P   +M IVP +   Q + ++   D G+V  GQ  TVK+ A+ Y
Sbjct: 445 GIVKNMRSNTIGGVVRPGDPIMEIVPLHERLQVDAKLNPMDRGYVQTGQRATVKISAYDY 504

Query: 385 TRYGTIDAELLSISRDSTTDEQLGLVFPAQIQLKTNHIMIDGQTVE--LTPGMSVVAEIK 442
           T YG +D +++ ++ D+T  +        ++ ++T+   I  +T +  ++ GM    EI 
Sbjct: 505 TTYGGLDGDVILVAPDTTVPQTPNAQPYYRVVVQTDRAYIGDETAKRLISAGMQATVEIH 564

Query: 443 TDKRRVIDYLLSPIQEYQAEALRER 467
           T  R ++++L+ P+ + + EA RER
Sbjct: 565 TGTRSIMEFLVKPVIKLRHEAFRER 589