Pairwise Alignments

Query, 467 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., HlyD family type I secretion periplasmic adaptor subunit from Magnetospirillum magneticum AMB-1

 Score =  137 bits (344), Expect = 9e-37
 Identities = 107/425 (25%), Positives = 197/425 (46%), Gaps = 17/425 (4%)

Query: 52  PFARVTALTLSLGVLAALLWAYWGKLDVQATATGRLVVSGRSQVIQSYEQSRLLSIHVRD 111
           P AR+  + LS  ++  +LWA  G+L+V + ATG +  S + + +   E   +  I V +
Sbjct: 27  PIARLMVMALSGALVVFILWASIGQLEVVSVATGEIAPSSQLKQLSHLEGGIVGEILVAE 86

Query: 112 GQRVEKGAPLLTLDTLGVNQDITRLVSQAEFQTNELIRYRTLLNDQLLTHDP-----MFT 166
           G +V  G PLLTL       D+  L  +      E++R     + +     P      + 
Sbjct: 87  GDQVRAGQPLLTLQATKSTADLGELSQRLLSLRFEILRLEAASDSKSEIQFPADLLKQYP 146

Query: 167 ALPAEQQALIHENYLSEKNEFDSTLASITAEMKVNRTSQAARQSDIHALLQLTENISQRL 226
            L  E  A          +E       I    +     ++  Q+D H+L  L E I+   
Sbjct: 147 DLAKEADAFFRSRRARLASELSGADEQIKQRQQEINGFRSRIQNDRHSLELLNEQIAISD 206

Query: 227 AARKKLNQVKVIGHVEYLEQEKELL----EAQRQVAQQRAELEVLKSQYESLEERLTGFK 282
              KK  Q + + H++ L+Q  EL     EA+  +++  A L    +Q    + ++T   
Sbjct: 207 DLLKKDLQNRFV-HIDLLKQASELKGRINEAESALSRSNAALAEAHAQ----KAKVTAAF 261

Query: 283 AQKQREWLEKRRQARLQLASLNQELSKVREREQLEIIRSPVDGTVQQLSVYTLGAVLQPA 342
            ++ R  L+K   AR + + L+Q  +   +     +I +PV G V++L   T G V++P 
Sbjct: 262 EEESRTQLDK---ARREFSELSQRTASFSDNLDRTVINAPVGGIVKKLYFVTQGGVIRPG 318

Query: 343 QNLMIIVPENRVQQAEVQILNKDVGFVYPGQSVTVKVDAFPYTRYGTIDAELLSISRDST 402
             ++ +VP +     E ++  ++VG+V  G    VK+ +     +G + A+++ IS D+ 
Sbjct: 319 APVIDLVPSDDRLLVEAKLPPQNVGYVKVGDPAYVKLTSPDAALFGRLHAKVIHISPDTF 378

Query: 403 TDEQLGLVFPAQIQLKTNHIMIDGQTVELTPGMSVVAEIKTDKRRVIDYLLSPIQEYQAE 462
           T+E++G  +  ++ ++ +     G+  +L PG+ V  +I T  R V+ YL  P     +E
Sbjct: 379 TEEKIGTFYKVRLSVERDFFDGGGERYQLLPGVQVAVDIVTGTRSVMRYLFGPYLRQMSE 438

Query: 463 ALRER 467
           ++RER
Sbjct: 439 SMRER 443