Pairwise Alignments

Query, 467 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 468 a.a., HlyD family type I secretion periplasmic adaptor subunit from Magnetospirillum magneticum AMB-1

 Score =  167 bits (424), Expect = 5e-46
 Identities = 118/429 (27%), Positives = 209/429 (48%), Gaps = 9/429 (2%)

Query: 43  LALAQRPPSPFARVTALTLSLGVLAALLWAYWGKLDVQATATGRLVVSGRSQVIQSYEQS 102
           L L +   S   R T L  S    A ++WA +  +   ATA G+++ +G+ Q +Q  E  
Sbjct: 45  LVLEESGTSGLIRFTMLLASTTTAAFVVWASFTDVPEIATAEGQIIPTGQVQAVQHLEGG 104

Query: 103 RLLSIHVRDGQRVEKGAPLLTLDTLGVNQDITRLVSQAEFQTNELIRYRTLLNDQLLTHD 162
            +  I  RDG  VE GAP++ L+      D+ +  ++      +  R R L  ++     
Sbjct: 105 IVQDILARDGDLVEAGAPIVRLNAAQAISDLEQTRAREATLLIKAERLRALAEER----Q 160

Query: 163 PMFTALPAEQQALIHEN---YLSEKNEFDSTLASITAEMKVNRTSQAARQSDIHALLQLT 219
           P F+ +P     L+ +N   + S+    D++ + I ++M+  R+     +S   +L +  
Sbjct: 161 PDFSNMPKGYDRLMSDNMAIFNSQSQARDTSRSVILSQMEQKRSDLRLLESQERSLREQL 220

Query: 220 ENISQRLAARKKLNQVKVIGHVEYLEQEKELLEAQRQVAQQRAELEVLKSQYESLEERLT 279
             + + +  R++L    ++  V +L+ ++EL   Q ++A+   +    +     +E RL 
Sbjct: 221 GPLQEEMTMRQELVAKGLVSRVVFLDTKRELSRVQGELARLIGQEVTAREALSEVENRLM 280

Query: 280 GFKAQKQREWLEKRRQARLQLASLNQELSKVRER-EQLEIIRSPVDGTVQQLSVYTLGAV 338
             K+  Q+  ++       +LA + + + ++ +R  +LEII +PV G V+ L+V   GAV
Sbjct: 281 DNKSSLQKSTMDDLGTTINELAQVQESIGRLEDRVARLEII-APVRGLVKGLTVKNQGAV 339

Query: 339 LQPAQNLMIIVPENRVQQAEVQILNKDVGFVYPGQSVTVKVDAFPYTRYGTIDAELLSIS 398
           +Q   N+  +VP     + + +I  KDVG +  GQ V VKV  + + RYG +D  L  IS
Sbjct: 340 IQAGGNVCEVVPVETQMKVDAKINTKDVGHLKIGQPVRVKVTTYDFARYGAVDGTLTKIS 399

Query: 399 RDSTTDEQLGLVFPAQIQLKTNHIMIDGQTVELTPGMSVVAEIKTDKRRVIDYLLSPIQE 458
             S  DE+    F   I LK N++ +      + PGMSV AEI T  + ++ Y+L PI  
Sbjct: 400 ASSFADEKGNPFFKGVIDLKHNYVGLTPGRYGIQPGMSVTAEIITGDKTLLQYMLKPIFT 459

Query: 459 YQAEALRER 467
              ++  ER
Sbjct: 460 QIQQSFHER 468