Pairwise Alignments

Query, 467 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 419 a.a., HlyD family efflux transporter periplasmic adaptor subunit from Erwinia tracheiphila SCR3

 Score = 92.4 bits (228), Expect = 3e-23
 Identities = 91/418 (21%), Positives = 178/418 (42%), Gaps = 48/418 (11%)

Query: 52  PFARVTALTLSLGVLAALLWAYWGKLDVQATATGRLVVSGRSQVIQSYEQSRLLSIHVRD 111
           P+  V    + L  L  +L+  +G    + TA G L        I +     +  I++ +
Sbjct: 28  PWRWVNISLVVLVTLIVVLFCIFGSYTKRETAKGSLRPVEGMMNIMAVNSGTVTDINMVE 87

Query: 112 GQRVEKGAPLLTLD---TLGVNQDITRLVSQAEFQTNELIRYRTLLNDQLLTHDPMFTAL 168
           GQ V+KG  L T+    T  +      +  Q E Q   L+R R  L+   L        L
Sbjct: 88  GQSVKKGDILATVSSEITTQLGSTRVMIAEQLEQQLTGLMRERKNLDTLNLE---TIRGL 144

Query: 169 PAEQQALIHENYLSEKNEFDSTLASITAEMKVNRTSQAARQSDIHALLQLTENISQRLAA 228
             ++  L+ +    ++ +   TL    A  +V +  Q  R     +  Q+ +  S  L A
Sbjct: 145 EEKKTLLLQQIDQLKRMKSQRTLQINLARGQVKKL-QLMRDKGFASATQVEQQQSTLLDA 203

Query: 229 RKKLNQVKVIGHVEYLEQEKELLEAQRQVAQQRAELEVLKSQYESLEERLTGFKAQKQRE 288
           + +L           L+ E++ ++ Q+++ Q   +L      ++S               
Sbjct: 204 QARL-----------LDVERQRIDVQQKLTQTEQQLREQPVNFQS--------------- 237

Query: 289 WLEKRRQARLQLASLNQELSKVREREQLEIIRSPVDGTVQQLSVYTLGAVLQPAQNLMII 348
              K+     QLAS+ Q   +   R  + +  +P D  V  + V   G ++   Q++  +
Sbjct: 238 ---KKNDIERQLASVQQSRVENESRRSIRL-EAPDDAIVGSVLVKP-GQIVTAGQSVASL 292

Query: 349 VPENRVQQAEVQILNKDVGFVYPGQSVTVKVDAFPYTRYGTIDAELLSISRDSTTDEQLG 408
           +PEN   QA + + ++ +GF+ PGQ V ++ +A+P  ++G     ++ +SR S + +++ 
Sbjct: 293 LPENAELQARIMLSSRSIGFIKPGQRVVLRYEAYPSQKFGPQFGTVVGVSRVSLSPQEVS 352

Query: 409 LV----------FPAQIQLKTNHIMIDGQTVELTPGMSVVAEIKTDKRRVIDYLLSPI 456
            +          +  +++L    +   G   +L PG ++ A+  TDKRRV  ++L P+
Sbjct: 353 HLTGDMQVQESFYQVRVKLDNQFVSAYGHNEKLPPGGALEADFITDKRRVYQWVLEPL 410