Pairwise Alignments

Query, 467 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 426 a.a., HlyD family secretion protein from Erwinia tracheiphila SCR3

 Score = 77.0 bits (188), Expect = 1e-18
 Identities = 91/432 (21%), Positives = 179/432 (41%), Gaps = 52/432 (12%)

Query: 49  PPSPFARVTALTLSLGVLAALLWAYWGKLDVQATATGRLVVSGRSQVIQSYEQSRLLSIH 108
           PP     V+  T+ L  L  L+    G    +    G LV   R+  + S  +  ++S  
Sbjct: 23  PPLSPLLVSGFTI-LFFLCLLILLISGTYTRRVAVRGELVSVPRAITLFSEARGVIVSQR 81

Query: 109 VRDGQRVEKGAPLLTLDTLGVNQDITRLVSQAEFQTNELIRYRTLLNDQLLTHDPMFTAL 168
           V  G+RV+KG PL+ +D           +S+        IR R  +  Q+ T + + + L
Sbjct: 82  VWPGERVKKGQPLMDID-----------ISRTTLSGGVSIRQRETIRGQINTVESIISRL 130

Query: 169 PAEQQALIHENYLSEKNEFDSTLASITAEMKVNRTSQAARQSDIH-ALLQLTENISQRLA 227
             E + +  EN  ++K  ++  L          R+S    QS    A+++      +   
Sbjct: 131 -RENRKITLENLTAQKARYEEAL---------RRSSDILHQSQQGIAIMKANMENYRDYH 180

Query: 228 ARKKLNQVKVIGHVE-YLEQEKELLEAQRQVAQQRAELEVLKSQYESLEERLTGFKAQKQ 286
            R  +NQ ++      Y +Q+ +LL    Q  Q   ++  L+    ++  + T F     
Sbjct: 181 RRGLINQDQLSSQTALYYQQQNDLLTLVTQNEQNALQVMSLEG---NIHTQATDFD---- 233

Query: 287 REWLEKRRQARLQLASLNQELSKVREREQLEIIRSPVDGTVQQLSVYTLGAVLQPAQNLM 346
                +  Q  +Q + LN++L+       L ++ SP DG V  ++  T G V + +  LM
Sbjct: 234 ----NRIYQLEIQRSDLNRQLTDAEAAGTL-VVTSPTDGRVDSVNTAT-GQVARASDALM 287

Query: 347 IIVPENRVQ-QAEVQILNKDVGFVYPGQSVTVKVDAFPYTRYGTIDAELLSISRDSTTDE 405
            I+P N  + Q  + + +    F+  G  V ++ DAFP  ++G     +++++    T +
Sbjct: 288 QIIPGNVSRYQLVLWVPDNAAPFLRVGDKVNIRYDAFPSEKFGLYPGHIVAVAGVPATFQ 347

Query: 406 QLGLV--------------FPAQIQLKTNHIMIDGQTVELTPGMSVVAEIKTDKRRVIDY 451
           ++                 +   ++  ++  +  G+ +    GM     +  ++RR+  +
Sbjct: 348 EMATYPSSPGSDALAPQTWYRVTVEPDSSRFVWQGRQLPAENGMKASVTLFLEERRLYQW 407

Query: 452 LLSPIQEYQAEA 463
           +LSP  +  A A
Sbjct: 408 ILSPFYDLAASA 419