Pairwise Alignments

Query, 467 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 391 a.a., type I secretion membrane fusion protein, HlyD family from Enterobacter asburiae PDN3

 Score =  139 bits (349), Expect = 2e-37
 Identities = 116/431 (26%), Positives = 194/431 (45%), Gaps = 61/431 (14%)

Query: 47  QRPPSPFARVTALTLSLGVLAALLWAYWGKLDVQATATGRLVVSGRSQVIQSYEQSRLLS 106
           + P  P + + A +L   +   + WA    LD   T +G+++ S   QVIQS E   + S
Sbjct: 12  KEPRLPRSSLVAWSLFALLAVFIAWASLFHLDEVTTGSGKVIPSSHEQVIQSLEGGIIHS 71

Query: 107 IHVRDGQRVEKGAPLLTLDTLGVNQDITRLVSQAEFQTNELIRYRTLLNDQLLTHDPMFT 166
           + VR+G  VE+G  L  LD       +    S+              LN  L T      
Sbjct: 72  LMVREGDIVERGQQLAQLDRTKTESSVLESESR--------------LNAALAT------ 111

Query: 167 ALPAEQQALIHENYLSEKNEFDSTLASITAEMKVNRTSQAARQSDIHALLQLTENISQRL 226
              A  +A +++  L+   E D  +  +  E  + ++ + + +  +  L Q  E + + L
Sbjct: 112 --AARLKAEVNDTELAFPEELDDDVELVKQETALYQSRRESLEKGLAGLRQGAELVQREL 169

Query: 227 AARKKLNQVKVIGHVEYLEQEKELLEAQRQVAQQRAELEVLKSQYESLEERLTGFKAQKQ 286
           +  + L        VE L  E++  E + ++ +       +K+QY               
Sbjct: 170 SLTRPLVTQGAASKVEVLRLERQKNELENKITE-------MKNQYYV------------- 209

Query: 287 REWLEKRRQARLQLASLNQELS------KVREREQLEI-IRSPVDGTVQQLSVYTLGAVL 339
                   +AR +LA  N E+       K RE     +   +PV G V+ + V T+G V+
Sbjct: 210 --------RAREELAKANAEIEAQRSVMKGREDSLTRLTFNAPVRGIVKDIDVTTVGGVI 261

Query: 340 QPAQNLMIIVPENRVQQAEVQILNKDVGFVYPGQSVTVKVDAFPYTRYGTIDAELLSISR 399
            P   LM +VP +     E +I  +DV F++PGQ   VK+ A+ Y+ YG ++ E+  IS 
Sbjct: 262 PPNGKLMSLVPLDDQMVVEAKISPRDVAFIHPGQKALVKITAYDYSIYGGLEGEVTMISP 321

Query: 400 DSTTDEQLGLVFPAQIQLKT--NHIM-IDGQTVELTPGMSVVAEIKTDKRRVIDYLLSPI 456
           D+  DE    V+  ++ ++T  NH+    GQ   + PGM    +IKT  + ++DYLL P+
Sbjct: 322 DTLQDEVKRDVYYYRVYIRTDSNHLTNKQGQEFPVFPGMIATVDIKTGSKTILDYLLKPL 381

Query: 457 QEYQAEALRER 467
            + + EALRER
Sbjct: 382 NKAK-EALRER 391