Pairwise Alignments

Query, 467 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 282 a.a., HlyD family efflux transporter periplasmic adaptor subunit from Dickeya dianthicola ME23

 Score = 77.8 bits (190), Expect = 4e-19
 Identities = 45/174 (25%), Positives = 90/174 (51%)

Query: 294 RQARLQLASLNQELSKVREREQLEIIRSPVDGTVQQLSVYTLGAVLQPAQNLMIIVPENR 353
           R   +Q +S N   +   + ++L ++ SPV G ++ + V      + P + L+ I P + 
Sbjct: 109 RLEHVQPSSTNTSDAGENKADKLSLVVSPVRGIIRYILVDAATGQISPGRTLVEITPLDD 168

Query: 354 VQQAEVQILNKDVGFVYPGQSVTVKVDAFPYTRYGTIDAELLSISRDSTTDEQLGLVFPA 413
               E ++  +D+ F+ PGQ   +   A+    +G +   +  IS+D  TD+     +  
Sbjct: 169 KLLIEARVRLQDMAFLRPGQEAMMTFTAYDDITFGGLKGYIDQISQDMATDQAGNSFYLV 228

Query: 414 QIQLKTNHIMIDGQTVELTPGMSVVAEIKTDKRRVIDYLLSPIQEYQAEALRER 467
           +++ + N++    + + + PGM+    I T ++ ++ YLL PI++ +AEALRER
Sbjct: 229 RLRTEKNYLGNIDKPLLILPGMAAHVNIITGRKTLLSYLLKPIRQARAEALRER 282



 Score = 38.5 bits (88), Expect = 3e-07
 Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 3/97 (3%)

Query: 32  TEHHYEFLPAHLALAQRPPSPFARVTALTLSLGVLAALL---WAYWGKLDVQATATGRLV 88
           + HH +   A   + Q       R+  L++ + +  A+    WA   ++D    ATG+ +
Sbjct: 15  SSHHQQDPQALSDVGQALVEDTPRIIRLSIWIMLAFAVFLVGWASVAEIDEVVQATGKTL 74

Query: 89  VSGRSQVIQSYEQSRLLSIHVRDGQRVEKGAPLLTLD 125
              +   +Q+ E   L  I++R+GQ V  G PL+ L+
Sbjct: 75  SQSQRYRVQAQEAGELSDIYIREGQIVNIGDPLMRLE 111