Pairwise Alignments

Query, 467 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 410 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 58.2 bits (139), Expect = 5e-13
 Identities = 59/259 (22%), Positives = 119/259 (45%), Gaps = 31/259 (11%)

Query: 192 ASITAEMKVNRTSQAARQSDIHALLQLTENISQRLAARKKLNQVKVIGHVEYLEQEKELL 251
           A++TA +  N TS    + +     Q    +S     + + N VK    ++YLE+E   +
Sbjct: 98  ATVTAILGANVTSIKVIEGEKVNKGQALAYLSHPNLTQLQTNYVKSFSRLQYLEKE---M 154

Query: 252 EAQRQVAQQRAELEVLKSQYESLEERLTGFKAQKQREWLEKRRQARLQLASLNQELSKVR 311
           + Q+++ ++           ++ +E L  F+A K        +    QL  LN  +SK++
Sbjct: 155 QRQKRLYEEEV------GSGKTYQETLADFQAMKGEV-----KGYEAQLKQLNLNISKIQ 203

Query: 312 ERE--QLEIIRSPVDGTVQQLSVYTLGAVLQPAQNLMIIVPENRVQQAEVQILNKDVGFV 369
             +  Q   + SP++G ++++ V  +G    P + + +IV    +  A++ +  KDV  V
Sbjct: 204 NGDIYQYVPVVSPINGYIEKVLVQ-VGQFADPQKEMFMIVNTEHIH-ADLMVFEKDVHKV 261

Query: 370 YPGQSVTVKVDAFPYTRYGTIDAELLSISRDSTTDEQLGLVFPAQIQLKTNHIMIDGQTV 429
             GQ V+ +V++ P  +   ++AE+ S+ +    +       P  + +   H  I+ +  
Sbjct: 262 KEGQKVSFRVESVPGEQ---LEAEIYSVGKQFEQN-------PKAVHV---HAEIESKED 308

Query: 430 ELTPGMSVVAEIKTDKRRV 448
            L PGM +  +I T+   V
Sbjct: 309 FLIPGMYINGKIHTESESV 327