Pairwise Alignments

Query, 467 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 387 a.a., Multidrug resistance efflux pump from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 62.4 bits (150), Expect = 3e-14
 Identities = 81/382 (21%), Positives = 146/382 (38%), Gaps = 60/382 (15%)

Query: 19  MKRFFGQKSPHQPTEHHYEFLPAHLALAQRPPSPFARVTALTLSLGVLAALLWAYWGKLD 78
           MK  F     +Q TEH+   +           S    ++ L +  G+L +L + Y   +D
Sbjct: 1   MKTIFPASIINQTTEHYQSKISVR--------SKVIYLSVLLVLTGILVSLPFIY---VD 49

Query: 79  VQATATGRLVVSGRSQVIQSYEQSRLLSIHVRDGQRVEKGAPLLTLDTLGVNQDITRLVS 138
           V  +A GR   S     I S    R+ SI + + + V KG  L  + +  V+ +I  + S
Sbjct: 50  VSVSARGRFQTSLGRNEIHSPVSGRVSSISIVENESVGKGQVLAEIKSDQVDLEIDGVDS 109

Query: 139 QAEFQTNELIRYRTLLNDQLLTHDPMFTALPAEQQALIHENYLSEKNEFDSTLASITAEM 198
           +     N +   R ++                     +  N + E           T   
Sbjct: 110 RKALVQNFIGDLRKMMK--------------------LSPNRIDE-------FVGRTLTT 142

Query: 199 KVNRTSQAARQSDIHALLQLTENISQRLAARKKLNQVKVIGHVEYLEQEKELLEAQRQVA 258
           K  + +     S +  L  + E   + L   K L   K I  VEY E             
Sbjct: 143 KYYQAAFFEYVSGVQQLQTVLEKEKRDLKRAKVLFDSKAISAVEYDEY------------ 190

Query: 259 QQRAELEVLKSQYESLEERLTGFKAQKQREWLEKRRQARLQLASLNQELSKVREREQLEI 318
                    +S++E     L  + ++K   W ++ R  + +   L+    ++R++     
Sbjct: 191 ---------RSKFEQSLANLDIYHSKKISSWEQELRDYQNEWDKLSNNKKRLRDQLHQYK 241

Query: 319 IRSPVDGTVQQLSVYTLGAVLQPAQNLMIIVPENRVQQAEVQILNKDVGFVYPGQSVTVK 378
           I + V GT+        G  +   Q +  I P++ ++ A   +   D+ FV PGQ V ++
Sbjct: 242 IMAGVSGTIINFENIKTGDFVFANQKIAEISPDSTLK-AVAFLDPADIAFVQPGQRVNLQ 300

Query: 379 VDAFPYTRYGTIDAELLSISRD 400
           VDA+ Y ++G ++  +  IS+D
Sbjct: 301 VDAYNYNQWGLLEGTVEEISKD 322