Pairwise Alignments

Query, 467 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 451 a.a., Type I secretion system membrane fusion protein PrsE from Azospirillum sp. SherDot2

 Score =  112 bits (281), Expect = 2e-29
 Identities = 113/440 (25%), Positives = 180/440 (40%), Gaps = 31/440 (7%)

Query: 49  PPSPFARVTALTLSLGVLAA----LLWAYWGKLDVQATATGRLVVSGRSQVIQSYEQSRL 104
           P  P  R TAL  +L VL      L W +   LD  A A G ++V    + I   E   L
Sbjct: 22  PVEPSLRGTALAGALAVLVGFGGFLTWGFTASLDSAALAAGTVMVESHRKTISHLEGGIL 81

Query: 105 LSIHVRDGQRVEKGAPLLTLDTLGVNQDITRLVSQAEFQTNELIRYRTLLNDQLLTHDPM 164
             + V+DG  V  G  LL +D+      + +L  Q ++ T  L R   L  +Q     P+
Sbjct: 82  RDLLVKDGDPVRAGQVLLRMDSTQSQAVVAQL--QGQYWT-ALARLGRLRAEQSDAPKPL 138

Query: 165 FT---ALPAEQQALIHENYLSEKNEFDSTLASITAEMKVNRTSQAARQSDIHALLQLTEN 221
           FT           +  E    E+  F S   S  A++ + R   +  + +I AL      
Sbjct: 139 FTDELVKAVRDNPVAAEAVAVEERLFRSRHDSYEAQLGIQRKQISQLRDEIAALE----- 193

Query: 222 ISQRLAARKKLNQVKVIGHV------EYLEQEKELLEAQRQVAQQRAELEVLKSQYESLE 275
            SQR+A   +L   +    V      +  E++  LLE QR VA     L  L +     E
Sbjct: 194 -SQRIATADRLRYTQEETRVVQGLLAKGYERKPRLLELQRNVADSEGRLGELMANKSKAE 252

Query: 276 ERLTGFKAQ-------KQREWLEKRRQARLQLASLNQELSKVREREQLEIIRSPVDGTVQ 328
           + +   +         ++ E     + A+  +A L++ L    +    + + +P  G V 
Sbjct: 253 QAIAAAELTMINIGNTRRSEVSTDLQAAQASVADLSERLRSADDVLLRQAVTAPQAGRVT 312

Query: 329 QLSVYTLGAVLQPAQNLMIIVPENRVQQAEVQILNKDVGFVYPGQSVTVKVDAFPYTRYG 388
            L  +T G V+     ++ IVP++     E ++   DV  V  G    VK+  +      
Sbjct: 313 GLKFFTTGGVIPAGAGILDIVPQDDAMIVEARVSPHDVQNVEVGSKAMVKLTGYRQRAVP 372

Query: 389 TIDAELLSISRDSTTDEQLGLV-FPAQIQLKTNHIMIDGQTVELTPGMSVVAEIKTDKRR 447
            +  +++S+S D   DE+ G   F A+I +    +      VEL PGM     I    RR
Sbjct: 373 PVAGQVVSLSADQLEDERTGAYYFAARISMDAAELKAL-PNVELHPGMPAEVMIHGHARR 431

Query: 448 VIDYLLSPIQEYQAEALRER 467
            IDY L+P+ +    A RE+
Sbjct: 432 AIDYFLTPLTDGLQRAFREK 451