Pairwise Alignments

Query, 467 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 467 a.a., Type I secretion system membrane fusion protein PrsE from Azospirillum sp. SherDot2

 Score =  126 bits (316), Expect = 2e-33
 Identities = 103/443 (23%), Positives = 204/443 (46%), Gaps = 25/443 (5%)

Query: 44  ALAQRPPSPFARVTA-----------LTLSLGV-LAALLWAYWGKLDVQATATGRLVVSG 91
           A A  P  PFA  TA             +S+   LAAL WA   +L+V ++A G +V   
Sbjct: 31  AAAAAPALPFATATAPESESRFGDGLFAVSIAAFLAALGWASIAELNVSSSAPGDVVPLA 90

Query: 92  RSQVIQSYEQSRLLSIHVRDGQRVEKGAPLLTLDTLGVNQDITRLVSQAEFQTNELIRYR 151
            +Q +Q +E   +  I V++G  V+ G  L+ LD      D+  L  +    + ++ R  
Sbjct: 91  YNQSVQHFEGGIVRDILVQEGDSVKAGQVLVELDQTKTRADLEELRLRLGSLSADIARLE 150

Query: 152 TLLNDQLLTHDPMFTALPAEQQALIHENYLSEKNEFDSTLASITAEMKVNRTSQAARQSD 211
             +  +     P    L  E+  L+ +     ++ F +    + +++ + R     R+  
Sbjct: 151 AEVTRRDSIDFP--ETLTRERPDLVAQT----RDLFRARRDRLASDIDIQRQDIVQREQQ 204

Query: 212 IHALL------QLTEN-ISQRLAARKKLNQVKVIGHVEYLEQEKELLEAQRQVAQQRAEL 264
           + A+       Q+ +  I ++L+  + L + ++   +++LE  ++       +A+ RA L
Sbjct: 205 MAAVRARISGSQVAQGLIREQLSISESLLKREITNRMKHLELLRDDARITGSIAEDRATL 264

Query: 265 EVLKSQYESLEERLTGFKAQKQREWLEKRRQARLQLASLNQELSKVREREQLEIIRSPVD 324
              ++       +L     + + E      +AR     L+Q L++ ++      +R+P+D
Sbjct: 265 AQAEAALAEARSKLVWIGRKYEEEGRNALDEARRNHNELSQRLTRYQDSLDRSSMRAPMD 324

Query: 325 GTVQQLSVYTLGAVLQPAQNLMIIVPENRVQQAEVQILNKDVGFVYPGQSVTVKVDAFPY 384
           G V+ L+V T GAV++  + ++ +VP +     + ++  +D+G+V   Q V V +     
Sbjct: 325 GIVKTLAVSTKGAVVKAGETVVELVPRDGNLVVDARLPVQDIGYVRADQPVVVTLAGSDA 384

Query: 385 TRYGTIDAELLSISRDSTTDEQLGLVFPAQIQLKTNHIMIDGQTVELTPGMSVVAEIKTD 444
           +R+G I+  + +IS D+  D      +  +++L        G+T EL PG+ V   I T 
Sbjct: 385 SRFGHIEGRVRTISPDTLLDANKQSYYKVRVELPVTRFDYGGKTYELFPGVRVTCSILTG 444

Query: 445 KRRVIDYLLSPIQEYQAEALRER 467
           +R ++DY+ SP+      A++ER
Sbjct: 445 RRTILDYVFSPVLNGLQHAMQER 467