Pairwise Alignments

Query, 467 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 396 a.a., Type I secretion system membrane fusion protein PrsE from Acinetobacter radioresistens SK82

 Score =  139 bits (350), Expect = 2e-37
 Identities = 118/441 (26%), Positives = 201/441 (45%), Gaps = 53/441 (12%)

Query: 33  EHHYEFLPAHLALAQRPPSPFARVTALTLSLGVLAALLWAYWGKLDVQATATGRLVVSGR 92
           +H  E   +     + PP P + +    + L +L  L+WA+  KL+  +T TG+++ S +
Sbjct: 3   DHKPELQRSMTVSYREPPLPKSSLVIWVVGLCLLVLLVWAWLFKLEEVSTGTGKVIASSK 62

Query: 93  SQVIQSYEQSRLLSIHVRDGQRVEKGAPLLTLDTLGVNQDITRLVSQAEFQTNELIRYRT 152
            QVIQS E   L  ++V++G  VE+G  L  LD      ++    S          R R+
Sbjct: 63  EQVIQSLEGGILTRLNVKEGDIVEQGQVLAQLDPTRFASNVGESESLLVSAQATAARLRS 122

Query: 153 LLNDQLLTHDPMFTALPA---EQQALIHENYLSEKNEFDSTLASITAEMKVNRTSQAARQ 209
            +N   L+       +PA   E+ AL    Y S ++  + +++ +   +++ R       
Sbjct: 123 EVNGTPLSFPESVRKVPALVQEETAL----YYSRRSNLEQSMSGLKQALELVRQE----- 173

Query: 210 SDIHALLQLTENISQRLAARKKLNQVKVIGHVEYLEQEKELLEAQRQVAQQRAELEVLKS 269
                 L +TE +  + AA                  E E+L  +R+    + ++  L++
Sbjct: 174 ------LVMTEPLVAKGAA-----------------SEVEVLRLKREANDLQNQMNDLQN 210

Query: 270 QYESLEERLTGFKAQKQREWLEKRRQARLQLASLNQELSKVREREQLEIIRSPVDGTVQQ 329
           QY             K RE L K   A   + +  Q +    +  Q    ++PV G V++
Sbjct: 211 QYYV-----------KAREELAK---ANTDIETQQQVVKGKSDTLQRTTFKAPVRGIVKE 256

Query: 330 LSVYTLGAVLQPAQNLMIIVPENRVQQAEVQILNKDVGFVYPGQSVTVKVDAFPYTRYGT 389
           + V T G V+     LM IVP +     E +I  +D+ F+ PGQ   VK+ A+ Y+ YG 
Sbjct: 257 IDVMTRGGVVPQNGKLMTIVPLDEQLLIEARISPRDIAFIRPGQDALVKITAYDYSIYGG 316

Query: 390 IDAELLSISRDSTTDEQLGLVFPAQIQLKT---NHIMIDGQTVELTPGMSVVAEIKTDKR 446
           +  ++  IS D+  DE     F  ++ ++T     I   GQ+  +TPGM    +I+T ++
Sbjct: 317 LKGKVTVISPDTIRDEVKQDQFYYRVYIRTATDKLINKAGQSFGITPGMVATVDIRTGQK 376

Query: 447 RVIDYLLSPIQEYQAEALRER 467
            V+DYLL P  + + EALRER
Sbjct: 377 TVLDYLLKPFNKAK-EALRER 396