Pairwise Alignments

Query, 721 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 673 a.a., Efflux ABC transporter, permease/ATP-binding protein Reut_A2584 from Variovorax sp. SCN45

 Score =  291 bits (745), Expect = 7e-83
 Identities = 194/573 (33%), Positives = 311/573 (54%), Gaps = 28/573 (4%)

Query: 164 KSQLRDVFLYAIALQIFALVSPMLFENVIDKVLV----GRSLSSLHV-LALA-MLALAIA 217
           + QL   F+  +      LV P L   ++D +L+    G+ + ++ V L L  +L  A+ 
Sbjct: 78  RKQLILGFVLTLISTAATLVPPYLTIPLMDDILIPFQNGQKIDTMRVGLYLGGLLVAALV 137

Query: 218 EPAYSYLRNTVFGHLASQVNAELSGRLYRHLVGLPLTYFKQRQTGQIIARV-REMAQIRQ 276
                + R  +   ++ ++ A+L    Y HL+ LPL YF  ++TG ++AR+  E  +I  
Sbjct: 138 GWGLGWARTYLLALVSERIGADLRTTTYEHLLTLPLDYFGGKRTGDLMARIGSETDRINV 197

Query: 277 FLTGSTLMLLLDLIFVTVFLAVMFHYASTLTWLVIGSLVIYFVLWLIAGPLIRKKVESEY 336
           FL+   L    D++ + +   ++      L   V+  + + F+ W+I   ++R ++ + +
Sbjct: 198 FLSLHALDFANDVLMIVMTAVILISINPLLA--VVTLVPLPFIAWMIH--VVRDRLRTGF 253

Query: 337 ESD----ANATTFLTEAVTGIETIKTTATEHRFLEQWQRILSQQLNRSFDAQKSGLIAGQ 392
           E      +  T  L + + GI  +K  A E R  E+++   +  L  +    ++  +   
Sbjct: 254 EKIDRVWSEVTNVLADTIPGIRVVKAFAQERREAERFRVANAYNLQVNDKLNRTWSLFTP 313

Query: 393 AIALVQKLTAALLLWWGVSAVLKGEITPGQLVAFNMLAGHVTQPVLRLAQIWQDFQHTLI 452
            ++L+ ++   ++  +G+  V +G IT G L AF    G     +  +++I    Q    
Sbjct: 314 TVSLLTEIGLLVVWAFGIWQVARGSITVGVLTAFIAYIGRFYTRLDSMSRIVSVTQKAAA 373

Query: 453 ALRRVGDILD------EPRENSKQGLASVPELDGGIEFSNIRFRYHQDAPEVLANLSLKI 506
             +R+ DILD      EP    K     V  + G IE S + FRY   A  V+ +L L I
Sbjct: 374 GAKRIFDILDHVSNVPEPANPVK-----VERVQGRIEMSGLGFRYGSRA--VIHDLDLVI 426

Query: 507 KPGQFIGVTGPSGSGKSTLTRLLQRLYVPQHGQVLVDGMDLAIADPVSLRRNMSVVLQES 566
           +PG+ IG+ G SGSGKSTL  L+ R Y    G + VDG D+        RR++ +VLQE 
Sbjct: 427 EPGEMIGLVGHSGSGKSTLVNLICRFYDVTDGAIKVDGTDIRRFAVADYRRHVGLVLQEP 486

Query: 567 ILFSGSVADNIRLCKPQASDEEIRHAAQLAGALAFIEGLPHGFNQPVGEKGAALSGGQRQ 626
            LF G++A NI   KP A+ EEI  AA+ A A  FI  L HG++  VGE+G  LSGG+RQ
Sbjct: 487 FLFFGTIAQNIAYGKPDATREEIVAAARAAHAHDFILRLQHGYDSLVGERGQGLSGGERQ 546

Query: 627 RIALARALLVNPRILLLDEATSALDYNSEASIMSNMDEICRGRTVISIAHRLNTIRHADN 686
           RI++ARALL++PRIL+LDEATSA+D  +E  I   +D + +GRT I+IAHRL+T+R AD 
Sbjct: 547 RISIARALLIDPRILILDEATSAVDTETEKEIQKALDNLVQGRTTIAIAHRLSTLRKADR 606

Query: 687 IFVLDKGQVAESGTHEELLAQQGLYAKLWTQQV 719
           + V+D+G+V E G H+ L+A+QG Y +L+  Q+
Sbjct: 607 LVVMDRGEVVEVGPHDALMAKQGAYWRLYQAQL 639