Pairwise Alignments

Query, 721 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 747 a.a., RTX toxin transporter, ATP-binding protein from Variovorax sp. SCN45

 Score =  572 bits (1474), Expect = e-167
 Identities = 308/718 (42%), Positives = 449/718 (62%), Gaps = 11/718 (1%)

Query: 14  EQTLPQESPRTNWGIEAVVYAGQQFHK-KSTSSQLKHALGVSYAN-LTDMEMREAADYLG 71
           E+  PQE+P         +    +FH+  + +S L H LG++ +  +    +  AA +LG
Sbjct: 14  ERARPQEAPDAGAPSLIALCTIARFHQIAADASLLSHQLGLASSEPINTATLLGAAKHLG 73

Query: 72  LKSQITKLSIQAFNTLPLPALIEY-----QGGWKVMIQTDDNGWTAYDPATDSLHTLSFT 126
           LK++ ++ ++   +  PLPAL        Q  + ++ Q D       DP++ +   +   
Sbjct: 74  LKAKSSRTTLDRLSLTPLPALAVLRDESGQERFVILAQCDAQRVLLQDPSSSNGRPVIEP 133

Query: 127 SAESTAHYK---VMLIADESLSVKEVKFGLSWFAPSILRQKSQLRDVFLYAIALQIFALV 183
                AH+    +++ +  SL+    KF  SWF PS+++ +  L +V   +  LQ+FALV
Sbjct: 134 LEVFAAHWTGELILITSRASLAGDLAKFDFSWFIPSLVKHRKLLGEVLFISFILQLFALV 193

Query: 184 SPMLFENVIDKVLVGRSLSSLHVLALAMLALAIAEPAYSYLRNTVFGHLASQVNAELSGR 243
           SP+ F+ V+DKVLV R L++L VL + +L + + E   + LR+ VF H  ++++ EL  R
Sbjct: 194 SPLFFQVVMDKVLVHRGLTTLDVLVIGLLVVVVFESLLNGLRSYVFSHTTNRIDVELGAR 253

Query: 244 LYRHLVGLPLTYFKQRQTGQIIARVREMAQIRQFLTGSTLMLLLDLIFVTVFLAVMFHYA 303
           L+RHLV LPL YF+ R+ G  +ARVRE+  IR FLTG+ L +LLD++F  VF+AVM  Y+
Sbjct: 254 LFRHLVQLPLAYFQARRVGDSVARVRELENIRSFLTGNALTVLLDVVFSIVFVAVMLFYS 313

Query: 304 STLTWLVIGSLVIYFVLWLIAGPLIRKKVESEYESDANATTFLTEAVTGIETIKTTATEH 363
             LT +V+ S+ +YF L L   P++R +++ ++   A     L E V+ I+T+K TA E 
Sbjct: 314 VPLTLIVLASMPLYFGLSLAVVPILRSRLDEKFARGAENQAMLVETVSAIQTVKATALEP 373

Query: 364 RFLEQWQRILSQQLNRSFDAQKSGLIAGQAIALVQKLTAALLLWWGVSAVLKGEITPGQL 423
            F  +W   L+  ++ SF  Q     A + + L+ KL  A  LW+G   V+  ++T GQ 
Sbjct: 374 AFGRRWDNQLAAYISASFRTQNLASWANEGVNLIGKLVNAATLWYGAHLVMNNDLTVGQF 433

Query: 424 VAFNMLAGHVTQPVLRLAQIWQDFQHTLIALRRVGDILDEPRENSKQGLASVPELDGGIE 483
           VAFNM A  V+QP++R+AQ+W DFQ T I++ R+GDIL+   E      A +P L G + 
Sbjct: 434 VAFNMFAQRVSQPIMRMAQLWTDFQQTGISMARLGDILNTRTEVPPSTAAQLPALKGRVT 493

Query: 484 FSNIRFRYHQDAPEVLANLSLKIKPGQFIGVTGPSGSGKSTLTRLLQRLYVPQHGQVLVD 543
             N+ FRY  +A  VL  +SL ++PG+ IG+ G SGSGKSTLT+L+QRLY P+ G++LVD
Sbjct: 494 LDNLTFRYRPEAAPVLNGVSLDVRPGEVIGIVGRSGSGKSTLTKLIQRLYAPEQGRLLVD 553

Query: 544 GMDLAIADPVSLRRNMSVVLQESILFSGSVADNIRLCKPQASDEEIRHAAQLAGALAFIE 603
           G+D+++ D   LR  + VVLQE+ LF+ SV +NI +  P A  E I HAAQLAGA  FI 
Sbjct: 554 GIDISLIDAAQLRMQVGVVLQENTLFNRSVRENIAIVDPAAPLEAIIHAAQLAGAHEFIS 613

Query: 604 GLPHGFNQPVGEKGAALSGGQRQRIALARALLVNPRILLLDEATSALDYNSEASIMSNMD 663
            LP G++  VGE+GA+LSGGQRQRIA+ARAL  +PR+L+ DEATSALDY SEA +  NM 
Sbjct: 614 ELPEGYDTMVGEQGASLSGGQRQRIAIARALFTHPRVLIFDEATSALDYESEAIVQRNMA 673

Query: 664 EICRGRTVISIAHRLNTIRHADNIFVLDKGQVAESGTHEELLAQ-QGLYAKLWTQQVG 720
            ICRGRTV  IAHRL+ +RHA+ I V+DKG++ E GTHE LLA+ +G+YA LW  Q G
Sbjct: 674 HICRGRTVFIIAHRLSAVRHANRIIVMDKGKIVEGGTHESLLARPKGIYAHLWNMQGG 731