Pairwise Alignments

Query, 721 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 704 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

 Score =  283 bits (723), Expect = 3e-80
 Identities = 184/690 (26%), Positives = 340/690 (49%), Gaps = 15/690 (2%)

Query: 28  IEAVVYAGQQFHKKSTSSQLKHALGVSYANLTDMEMREAADYLGLKSQITKLSIQAFNTL 87
           + ++VY  + +   ++   L + L ++   LT      +A+  GL ++  +  +     L
Sbjct: 6   LNSLVYVSRYYGLANSPEALINGLPLADGKLTPFLFPRSAERAGLIAKENRAPLDQIPHL 65

Query: 88  PLPALIEYQGGWKVMIQTDDNGWTAYDPAT--DSLHTLSFTSAESTAHY--------KVM 137
             P ++  +GG   ++ + +      +  T    L  ++++ ++  A Y        K  
Sbjct: 66  VFPVVLLLKGGEACVLNSINQETQEAEIVTAESGLVPVAYSLSDLEAMYIGRYFMVKKQF 125

Query: 138 LIADESLSVKEVKFGLSWFAPSILRQKSQLRDVFLYAIALQIFALVSPMLFENVIDKVLV 197
              + S  V + + G  WF  +I + K   RDV + ++ + +FA+ +PM    V DKV+ 
Sbjct: 126 RFDERSPEVLKPRDG-HWFWSTIYKSKHIYRDVLIASLLINLFAVAAPMFSRIVYDKVVP 184

Query: 198 GRSLSSLHVLALAMLALAIAEPAYSYLRNTVFGHLASQVNAELSGRLYRHLVGLPLTYFK 257
             +  +L VL+  +L + + +  +  LR+        + +  +S +L+  ++G+ +   +
Sbjct: 185 NLAFETLWVLSSGILVIFLFDFVFKMLRSYFIDVAGKKSDILISSKLFSKVMGIRMEA-R 243

Query: 258 QRQTGQIIARVREMAQIRQFLTGSTLMLLLDLIFVTVFLAVMFHYASTLTWL-VIGSLVI 316
               G     ++E   IR+F T +T+  L+DL F  +FL +++  A  L W+ VIG L++
Sbjct: 244 PPSVGAFARHLQEFESIREFFTSATISSLIDLPFALLFLVLIWLMAGHLVWVPVIGVLIL 303

Query: 317 YFVLWLIAGPLIRKKVESEYESDANATTFLTEAVTGIETIKTTATEHRFLEQWQRILSQQ 376
               +LI   L ++ +E      +     L E++ G+ET+K    + +F  +W+  ++  
Sbjct: 304 VIYSFLIQSRL-KRAIEEGSRLASQKYANLIESLAGLETVKLFGAQGQFQYRWEEAVAHM 362

Query: 377 LNRSFDAQKSGLIAGQAIALVQKLTAALLLWWGVSAVLKGEITPGQLVAFNMLAGHVTQP 436
            N +  +++           VQ+     ++  GV  +  G++T G L+A  ML+G    P
Sbjct: 363 ANWNIKSRRITDSIQNTAGFVQQAANIGMIIVGVYLISNGDLTMGGLIAATMLSGRAIGP 422

Query: 437 VLRLAQIWQDFQHTLIALRRVGDILDEPRENSK-QGLASVPELDGGIEFSNIRFRYHQDA 495
           +++L+ +   +     ++  +  ++  P E  + +     P + G IE   + F Y    
Sbjct: 423 LVQLSLLSTRYNQAKSSMTIIEQVMSMPDEQEEGKRYIHRPIIQGKIELDRVTFHYPNSP 482

Query: 496 PEVLANLSLKIKPGQFIGVTGPSGSGKSTLTRLLQRLYVPQHGQVLVDGMDLAIADPVSL 555
              + +LSL I PG+ + + G  GSGK+TL RL+  LY P  G V +D  D++    + +
Sbjct: 483 IASVRDLSLTIHPGEKVAIIGRIGSGKTTLERLIMGLYKPTEGHVRIDDTDISQLHHIDI 542

Query: 556 RRNMSVVLQESILFSGSVADNIRLCKPQASDEEIRHAAQLAGALAFIEGLPHGFNQPVGE 615
           RRN+  V Q+S+LF GS+ DNI L +P + D E+  AA  AG   F +  P G  + VGE
Sbjct: 543 RRNIGCVPQDSVLFYGSIRDNITLGRPLSDDREVMDAANRAGVTVFTQQDPAGLERQVGE 602

Query: 616 KGAALSGGQRQRIALARALLVNPRILLLDEATSALDYNSEASIMSNMDEICRGRTVISIA 675
            G  LSGGQRQ +++ARA L  P +LL+DE TSA+D  SE  I   + ++    T+I I 
Sbjct: 603 GGMLLSGGQRQSVSIARAFLGRPPVLLMDEPTSAMDNRSEMHIKQQLSQLKPSETLILIT 662

Query: 676 HRLNTIRHADNIFVLDKGQVAESGTHEELL 705
           H+ + +   D + V++KG +   G   E+L
Sbjct: 663 HKTSMLDVVDRVIVMEKGCIIADGPKHEVL 692